Gm31831 Gene Detail

Summary

• Symbol
  Gm31831
• Name
  predicted gene, 31831
• Synonyms
  Gm42831

• Feature Type
  lncRNA gene
• IDs
  MGI:5590990
  NCBI Gene: 102634187
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr5:10352353-10407204 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  1951 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5590990	lncRNA gene	Chr5:10299059-10407204 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0006579	lincRNA gene	Chr5:7338133-7438575 (+)
A/J	MGP_AJ_G0006570	lincRNA gene	Chr5:7146349-7184465 (+)
AKR/J	MGP_AKRJ_G0006543	lincRNA gene	Chr5:7289297-7391279 (+)
BALB/cJ	MGP_BALBcJ_G0006545	lincRNA gene	Chr5:7289147-7395571 (+)
C3H/HeJ	MGP_C3HHeJ_G0006494	lincRNA gene	Chr5:7441189-7543169 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0006711	lincRNA gene	Chr5:7942450-8046063 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0006423	lincRNA gene	Chr5:7301067-7395970 (+)
CBA/J	MGP_CBAJ_G0006478	lincRNA gene	Chr5:8116716-8170414 (+)
DBA/2J	MGP_DBA2J_G0006498	lincRNA gene	Chr5:7214347-7312587 (+)
FVB/NJ	MGP_FVBNJ_G0006520	lincRNA gene	Chr5:6956641-7056997 (+)
LP/J	MGP_LPJ_G0006580	lincRNA gene	Chr5:7493395-7608650 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0006507	lincRNA gene	Chr5:8235041-8366633 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0006715	lincRNA gene	Chr5:7216543-7318308 (+)
PWK/PhJ	MGP_PWKPhJ_G0006361	lincRNA gene	Chr5:6986323-7086992 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0006270	lincRNA gene	Chr5:7478372-7507971 (+)
WSB/EiJ	MGP_WSBEiJ_G0006472	lincRNA gene	Chr5:7209827-7333297 (+)

Homology

• Gene Tree
  Gm31831
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  25
• RefSeq
  4

• Ensembl
  ENSMUSG00000105157 (Evidence)
• NCBI Gene
  102634187

Representative Sequences			Length	Strain/Species
genomic	102634187	NCBI Gene Model | MGI Sequence Detail	54852	C57BL/6J
transcript	XR_868247	RefSeq | MGI Sequence Detail	1533	C57BL/6J

Other
Accession IDs

MGI:5662968

References

• Summaries
  All 5
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;