Gm32158 Pseudogene Detail

Summary

• Symbol
  Gm32158
• Name
  predicted gene, 32158

• Feature Type
  pseudogene
  BioType Conflict
  
• IDs
  MGI:5591317
  NCBI Gene: 118568761
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr5:140532190-140532593 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  139 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5591317	pseudogene	Chr5:140524834-140532632 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0013298	pseudogene	Chr5:145637746-145638149 (+)
A/J	MGP_AJ_G0013277	pseudogene	Chr5:139426824-139427227 (+)
AKR/J	MGP_AKRJ_G0013242	pseudogene	Chr5:143787592-143787994 (+)
BALB/cJ	MGP_BALBcJ_G0013256	pseudogene	Chr5:140671078-140671481 (+)
C3H/HeJ	MGP_C3HHeJ_G0013106	pseudogene	Chr5:144574964-144575367 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0013625	pseudogene	Chr5:151031145-151031548 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011769	pseudogene	Chr5:133267291-133267676 (+)
CAST/EiJ	MGP_CASTEiJ_G0013519	pseudogene	Chr8:19220971-19221373 (-)
CBA/J	MGP_CBAJ_G0013074	pseudogene	Chr5:157235842-157236245 (+)
DBA/2J	MGP_DBA2J_G0013157	pseudogene	Chr5:139239234-139239637 (+)
FVB/NJ	MGP_FVBNJ_G0013156	pseudogene	Chr5:138390832-138392584 (+)
LP/J	MGP_LPJ_G0013225	pseudogene	Chr5:146248404-146248807 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0013173	pseudogene	Chr5:159824951-159825354 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0013627	pseudogene	Chr5:143626488-143626891 (+)
PWK/PhJ	MGP_PWKPhJ_G0012640	pseudogene	Chr5:138265742-138266143 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0012430	pseudogene	Chr5:141328931-141329338 (+)
WSB/EiJ	MGP_WSBEiJ_G0012865	pseudogene	Chr5:144400093-144400496 (+)

Homology

• Gene Tree
  Gm32158
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000105633 (Evidence)
• NCBI Gene
  118568761

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000105633	Ensembl Gene Model | MGI Sequence Detail	404	C57BL/6J
transcript	ENSMUST00000200135	Ensembl | MGI Sequence Detail	404	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;