Gm32950 Gene Detail

Summary

• Symbol
  Gm32950
• Name
  predicted gene, 32950

• Feature Type
  lncRNA gene
• IDs
  MGI:5592109
  NCBI Gene: 102635671
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr3:28856744-28859533 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  182 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5592109	lncRNA gene	Chr3:28844788-28859533 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0006142	lincRNA gene	Chr3:26197653-26200133 (-)
A/J	MGP_AJ_G0006132	lincRNA gene	Chr3:25924880-25927405 (-)
AKR/J	MGP_AKRJ_G0006109	lincRNA gene	Chr3:26308953-26311515 (-)
BALB/cJ	MGP_BALBcJ_G0006109	lincRNA gene	Chr3:25627102-25629620 (-)
C3H/HeJ	MGP_C3HHeJ_G0006059	lincRNA gene	Chr3:26345580-26348104 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0006270	lincRNA gene	Chr3:27589929-27593691 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0005586	lincRNA gene	Chr3:23942258-23944785 (-)
CAST/EiJ	MGP_CASTEiJ_G0005993	lincRNA gene	Chr3:26198448-26202732 (-)
CBA/J	MGP_CBAJ_G0006044	lincRNA gene	Chr3:28349955-28352457 (-)
DBA/2J	MGP_DBA2J_G0006064	lincRNA gene	Chr3:25507334-25510043 (-)
FVB/NJ	MGP_FVBNJ_G0006088	lincRNA gene	Chr3:24963031-24965578 (-)
LP/J	MGP_LPJ_G0006145	lincRNA gene	Chr3:26891150-26893705 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0006077	lincRNA gene	Chr3:30884904-30889224 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0006274	lincRNA gene	Chr3:26048386-26052057 (-)
PWK/PhJ	MGP_PWKPhJ_G0005939	lincRNA gene	Chr3:24988806-24991163 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0005848	lincRNA gene	Chr3:25586466-25589243 (-)
WSB/EiJ	MGP_WSBEiJ_G0006042	lincRNA gene	Chr3:26097612-26100153 (-)

Homology

• Gene Tree
  Gm32950
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  2
• Gene trapped
  1
• Radiation induced
  1
• Genomic Mutations
  1 involving Gm32950
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000103827 (Evidence)
• NCBI Gene
  102635671

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000103827	Ensembl Gene Model | MGI Sequence Detail	2790	C57BL/6J
transcript	ENSMUST00000193336	Ensembl | MGI Sequence Detail	489	Not Applicable

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 8

  Diseases 1

  Phenotypes 4
• Earliest
  J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
• Latest
  J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426

TSS for Gm32950:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr32869	Chr3:28859477-28859509 (-)	40 bp