Gm33049 Gene Detail

Summary

• Symbol
  Gm33049
• Name
  predicted gene, 33049

• Feature Type
  protein coding gene
  BioType Conflict
  
• IDs
  MGI:5592208
  NCBI Gene: 102635802
• Alliance
  gene page
• Transcription Start Sites
  3 TSS

Location &
Maps

• Sequence Map
  Chr15:88738910-88744875 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  239 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5592208	protein coding gene	Chr15:88738629-88746683 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm33049
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm33049
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  6
• RefSeq
  2

• Ensembl
  ENSMUSG00000120543 (Evidence)
• NCBI Gene
  102635802

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000120543	Ensembl Gene Model | MGI Sequence Detail	5966	C57BL/6J
transcript	ENSMUST00000244097	Ensembl | MGI Sequence Detail	1484	Not Applicable
polypeptide	XP_006521709	RefSeq | MGI Sequence Detail	254	C57BL/6J

References

• Summaries
  All 5

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm33049:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr132618	Chr15:88738904-88738918 (+)	1 bp
Tssr132619	Chr15:88742791-88742800 (+)	3,886 bp
Tssr132620	Chr15:88742821-88742835 (+)	3,918 bp