Gm33142 Gene Detail

Summary

• Symbol
  Gm33142
• Name
  predicted gene, 33142

• Feature Type
  unclassified non-coding RNA gene
• IDs
  MGI:5592301
  NCBI Gene: 102635930
• Alliance
  gene page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr8:121412138-121413004 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  132 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5592301	unclassified non-coding RNA gene	Chr8:121412138-121413004 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0002275	unclassified gene	Chr8:124126892-124127758 (+)
A/J	MGP_AJ_G0002252	unclassified gene	Chr8:118971024-118971890 (+)
AKR/J	MGP_AKRJ_G0002238	unclassified gene	Chr8:122436064-122436930 (+)
BALB/cJ	MGP_BALBcJ_G0002247	unclassified gene	Chr8:119185062-119185928 (+)
C3H/HeJ	MGP_C3HHeJ_G0002223	unclassified gene	Chr8:123169984-123170850 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0002372	unclassified gene	Chr8:128257015-128257881 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0001987	unclassified gene	Chr8:111845411-111846267 (+)
CAST/EiJ	MGP_CASTEiJ_G0002188	unclassified gene	Chr8:123164638-123165505 (+)
CBA/J	MGP_CBAJ_G0002217	unclassified gene	Chr8:132942210-132943076 (+)
DBA/2J	MGP_DBA2J_G0002220	unclassified gene	Chr8:118188390-118189256 (+)
FVB/NJ	MGP_FVBNJ_G0002230	unclassified gene	Chr8:117262430-117263296 (+)
LP/J	MGP_LPJ_G0002274	unclassified gene	Chr8:124248633-124249499 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0002204	unclassified gene	Chr8:135303368-135304234 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0002360	unclassified gene	Chr8:122601947-122602813 (+)
PWK/PhJ	MGP_PWKPhJ_G0002148	unclassified gene	Chr8:117973258-117974129 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0002111	unclassified gene	Chr8:121309399-121310266 (+)
WSB/EiJ	MGP_WSBEiJ_G0002215	unclassified gene	Chr8:123344726-123345592 (+)

Homology

• Gene Tree
  Gm33142
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000104484 (Evidence)
• NCBI Gene
  102635930

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000104484	Ensembl Gene Model | MGI Sequence Detail	867	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm33142:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr79786	Chr8:121412119-121412149 (+)	-4 bp
Tssr79787	Chr8:121412582-121412609 (+)	458 bp