Gm33248 Gene Detail

Summary

• Symbol
  Gm33248
• Name
  predicted gene, 33248

• Feature Type
  lncRNA gene
• IDs
  MGI:5592407
  NCBI Gene: 102636076
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr7:129269129-129295124 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  911 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5592407	lncRNA gene	Chr7:129269129-129298142 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0037080	sense intronic lncRNA gene	Chr7:134152991-134179687 (+)
A/J	MGP_AJ_G0037068	sense intronic lncRNA gene	Chr7:130503401-130529907 (+)
AKR/J	MGP_AKRJ_G0037015	sense intronic lncRNA gene	Chr7:133965205-133991094 (+)
BALB/cJ	MGP_BALBcJ_G0037059	sense intronic lncRNA gene	Chr7:130178302-130204243 (+)
C3H/HeJ	MGP_C3HHeJ_G0036746	sense intronic lncRNA gene	Chr7:133845768-133872620 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0037571	sense intronic lncRNA gene	Chr7:139332743-139358645 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0034615	sense intronic lncRNA gene	Chr7:131683494-131708824 (+)
CAST/EiJ	MGP_CASTEiJ_G0035932	sense intronic lncRNA gene	Chr7:125647748-125672929 (+)
CBA/J	MGP_CBAJ_G0036721	sense intronic lncRNA gene	Chr7:144093644-144120058 (+)
DBA/2J	MGP_DBA2J_G0036896	sense intronic lncRNA gene	Chr7:128502131-128528858 (+)
FVB/NJ	MGP_FVBNJ_G0036846	sense intronic lncRNA gene	Chr7:128363586-128389469 (+)
LP/J	MGP_LPJ_G0036943	sense intronic lncRNA gene	Chr7:135628687-135655520 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0036853	sense intronic lncRNA gene	Chr7:145119176-145145511 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0037689	sense intronic lncRNA gene	Chr7:132902718-132928662 (+)
PWK/PhJ	MGP_PWKPhJ_G0035626	sense intronic lncRNA gene	Chr7:121541443-121566953 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0035434	sense intronic lncRNA gene	Chr7:119739726-119764642 (+)
WSB/EiJ	MGP_WSBEiJ_G0036134	sense intronic lncRNA gene	Chr7:133903733-133929577 (+)

Homology

• Gene Tree
  Gm33248
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24
• RefSeq
  2

• Ensembl
  ENSMUSG00000108481 (Evidence)
• NCBI Gene
  102636076

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000108481	Ensembl Gene Model | MGI Sequence Detail	25996	C57BL/6J
transcript	ENSMUST00000205836	Ensembl | MGI Sequence Detail	617	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;