Gm33293 Gene Detail

Summary

• Symbol
  Gm33293
• Name
  predicted gene, 33293

• Feature Type
  lncRNA gene
• IDs
  MGI:5592452
  NCBI Gene: 102636139
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr5:67379444-67389030 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  203 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5592452	lncRNA gene	Chr5:67378216-67389030 (-)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm33293
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  17 phenotype references
  

• All Mutations and Alleles
  4
• Chemically induced (other)
  2
• Radiation induced
  1
• Spontaneous
  1
• Genomic Mutations
  4 involving Gm33293
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  5
• RefSeq
  1

• Ensembl
  ENSMUSG00000120155 (Evidence)
• NCBI Gene
  102636139

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000120155	Ensembl Gene Model | MGI Sequence Detail	9587	C57BL/6J
transcript	ENSMUST00000241632	Ensembl | MGI Sequence Detail	305	Not Applicable

References

• Summaries
  All 20

  Phenotypes 17
• Earliest
  J:5021 Batchelor AL, et al., A comparison of the mutagenic effectiveness of chronic neutron- and gamma-irradiation of mouse spermatogonia. Mutat Res. 1966 Jun;3(3):218-29
• Latest
  J:125425 Howell GR, et al., Mutation of a ubiquitously expressed mouse transmembrane protein (Tapt1) causes specific skeletal homeotic transformations. Genetics. 2007 Feb;175(2):699-707

TSS for Gm33293:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr51230	Chr5:67389026-67389029 (-)	2 bp