Gm34606 Gene Detail

Summary

• Symbol
  Gm34606
• Name
  predicted gene, 34606

• Feature Type
  lncRNA gene
• IDs
  MGI:5593765
  NCBI Gene: 102637911
• Alliance
  gene page
• Transcription Start Sites
  9 TSS

Location &
Maps

• Sequence Map
  Chr17:26748158-26755338 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  255 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5593765	lncRNA gene	Chr17:26748158-26755338 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Sequences &
Gene Models

• All Sequences
  4
• RefSeq
  2

• NCBI Gene
  102637911

Representative Sequences			Length	Strain/Species
genomic	102637911	NCBI Gene Model | MGI Sequence Detail	7181	C57BL/6J
transcript	XR_004939695	RefSeq | MGI Sequence Detail	1291	C57BL/6J

References

• Summaries
  All 2
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:90438 Mouse Genome Informatics Scientific Curators, Obtaining and loading genome assembly coordinates from NCBI annotations. 2005;

TSS for Gm34606:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr143239	Chr17:26750782-26750813 (+)	2,640 bp
Tssr143240	Chr17:26751853-26751860 (+)	3,699 bp
Tssr143241	Chr17:26751869-26751874 (+)	3,714 bp
Tssr143242	Chr17:26751883-26751904 (+)	3,736 bp
Tssr143243	Chr17:26751908-26751929 (+)	3,761 bp
Tssr143244	Chr17:26751939-26751946 (+)	3,785 bp
Tssr143245	Chr17:26753099-26753147 (+)	4,965 bp
Tssr5048	Chr17:26754305-26754331 (+)	6,160 bp
Tssr5050	Chr17:26754803-26754810 (+)	6,649 bp