Gm34978 Gene Detail

Summary

• Symbol
  Gm34978
• Name
  predicted gene, 34978

• Feature Type
  lncRNA gene
• IDs
  MGI:5594137
  NCBI Gene: 102638401
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr2:146680914-146682097 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  118 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5594137	lncRNA gene	Chr2:146675768-146682100 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm34978
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  1
• Gene trapped
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm34978
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  8
• RefSeq
  4

• Ensembl
  ENSMUSG00000120392 (Evidence)
• NCBI Gene
  102638401

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000120392	Ensembl Gene Model | MGI Sequence Detail	1184	C57BL/6J
transcript	ENSMUST00000243002	Ensembl | MGI Sequence Detail	1184	Not Applicable

References

• Summaries
  All 8

  Phenotypes 5
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
• Latest
  J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14

TSS for Gm34978:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr20612	Chr2:146680908-146680921 (+)	1 bp