Gm35702 Pseudogene Detail

Summary

• Symbol
  Gm35702
• Name
  predicted gene, 35702

• Feature Type
  pseudogene
• IDs
  MGI:5594861
  NCBI Gene: 102639372
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr5:13927180-13927690 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  121 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5594861	pseudogene	Chr5:13927156-13928170 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0012973	pseudogene	Chr5:11110241-11110751 (+)
A/J	no annotation
AKR/J	MGP_AKRJ_G0012927	pseudogene	Chr5:11351887-11352393 (+)
BALB/cJ	MGP_BALBcJ_G0012940	pseudogene	Chr5:11220866-11221376 (+)
C3H/HeJ	MGP_C3HHeJ_G0012791	pseudogene	Chr5:11306180-11306686 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0013300	pseudogene	Chr5:12309046-12309556 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011505	pseudogene	Chr5:9170535-9171045 (-)
CAST/EiJ	MGP_CASTEiJ_G0012527	pseudogene	Chr5:11057527-11058037 (+)
CBA/J	MGP_CBAJ_G0012762	pseudogene	Chr5:12155244-12155750 (+)
DBA/2J	MGP_DBA2J_G0012836	pseudogene	Chr5:11102523-11103029 (+)
FVB/NJ	MGP_FVBNJ_G0012839	pseudogene	Chr5:10552388-10552894 (+)
LP/J	MGP_LPJ_G0012907	pseudogene	Chr5:11458853-11459363 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0012853	pseudogene	Chr5:12940688-12941194 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0013299	pseudogene	Chr5:10947299-10947805 (+)
PWK/PhJ	MGP_PWKPhJ_G0012343	pseudogene	Chr5:10639635-10640145 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0012156	pseudogene	Chr5:10872817-10873323 (+)
WSB/EiJ	MGP_WSBEiJ_G0012561	pseudogene	Chr5:10921532-10922042 (+)

Homology

• Gene Tree
  Gm35702
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000105521 (Evidence)
• NCBI Gene
  102639372

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000105521	Ensembl Gene Model | MGI Sequence Detail	511	C57BL/6J
transcript	ENSMUST00000198653	Ensembl | MGI Sequence Detail	511	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;