Gm35939 Gene Detail

Summary

• Symbol
  Gm35939
• Name
  predicted gene, 35939

• Feature Type
  lncRNA gene
• IDs
  MGI:5595098
  NCBI Gene: 102639685
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr16:90321858-90326305 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  238 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5595098	lncRNA gene	Chr16:90321858-90326305 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Human Diseases

• References
  4 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  64 phenotype references
  

• All Mutations and Alleles
  13
• Gene trapped
  9
• Spontaneous
  1
• Targeted
  2
• Genomic Mutations
  4 involving Gm35939
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  4
• RefSeq
  2

• NCBI Gene
  102639685

Representative Sequences			Length	Strain/Species
genomic	102639685	NCBI Gene Model | MGI Sequence Detail	4448	C57BL/6J
transcript	XR_876231	RefSeq | MGI Sequence Detail	2856	C57BL/6J

References

• Summaries
  All 66

  Diseases 4

  Phenotypes 64
• Earliest
  J:42265 Huang TT, et al., Superoxide-mediated cytotoxicity in superoxide dismutase-deficient fetal fibroblasts. Arch Biochem Biophys. 1997 Aug 15;344(2):424-32
• Latest
  J:325522 Urbano-Gamez JD, et al., Prenatal treatment with rapamycin restores enhanced hippocampal mGluR-LTD and mushroom spine size in a Down's syndrome mouse model. Mol Brain. 2021 May 25;14(1):84