Gm36159 Gene Detail

Summary

• Symbol
  Gm36159
• Name
  predicted gene, 36159
• Synonyms
  Gm44512

• Feature Type
  lncRNA gene
• IDs
  MGI:5595318
  NCBI Gene: 102639971
• Alliance
  gene page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr7:24147779-24150752 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  222 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5595318	lncRNA gene	Chr7:24146997-24150760 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0007126	lincRNA gene	Chr7:22769646-22772618 (+)
A/J	MGP_AJ_G0007123	lincRNA gene	Chr7:22250641-22253603 (+)
AKR/J	MGP_AKRJ_G0007091	lincRNA gene	Chr7:22750629-22753602 (+)
BALB/cJ	MGP_BALBcJ_G0007099	lincRNA gene	Chr7:22464005-22466967 (+)
C3H/HeJ	MGP_C3HHeJ_G0007044	lincRNA gene	Chr7:23163326-23166298 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0007264	lincRNA gene	Chr7:23518164-23521137 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0006488	lincRNA gene	Chr7:23721627-23724648 (+)
CAST/EiJ	MGP_CASTEiJ_G0006947	lincRNA gene	Chr7:16626271-16632133 (+)
CBA/J	MGP_CBAJ_G0007025	lincRNA gene	Chr7:24402713-24405685 (+)
DBA/2J	MGP_DBA2J_G0007046	lincRNA gene	Chr7:22164207-22167171 (+)
FVB/NJ	MGP_FVBNJ_G0007069	lincRNA gene	Chr7:22124962-22127935 (+)
LP/J	MGP_LPJ_G0007129	lincRNA gene	Chr7:23124031-23127003 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0007049	lincRNA gene	Chr7:24177499-24180471 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0007271	lincRNA gene	Chr7:22464087-22467051 (+)
PWK/PhJ	MGP_PWKPhJ_G0006891	lincRNA gene	Chr7:17053121-17056157 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0006803	lincRNA gene	Chr7:13795767-13799102 (+)
WSB/EiJ	MGP_WSBEiJ_G0007009	lincRNA gene	Chr7:22586604-22589556 (+)

Homology

• Gene Tree
  Gm36159
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Gene trapped
  1
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000108360 (Evidence)
• NCBI Gene
  102639971

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000108360	Ensembl Gene Model | MGI Sequence Detail	2974	C57BL/6J
transcript	ENSMUST00000206737	Ensembl | MGI Sequence Detail	549	Not Applicable

Other
Accession IDs

MGI:5753088

References

• Summaries
  All 7

  Phenotypes 2
• Earliest
  J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14

TSS for Gm36159:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr64969	Chr7:24150201-24150229 (+)	2,436 bp
Tssr2129	Chr7:24150266-24150272 (+)	2,490 bp