Gm36934 Pseudogene Detail

Summary

• Symbol
  Gm36934
• Name
  predicted gene, 36934

• Feature Type
  pseudogene
• IDs
  MGI:5610162
  NCBI Gene: 115487473
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:155740706-155741011 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  75 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5610162	pseudogene	Chr1:155739798-155741344 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0010402	pseudogene	Chr1:160806860-160807165 (+)
A/J	MGP_AJ_G0010392	pseudogene	Chr1:154363198-154363503 (+)
AKR/J	MGP_AKRJ_G0010360	pseudogene	Chr1:159091693-159091998 (+)
BALB/cJ	MGP_BALBcJ_G0010367	pseudogene	Chr1:154865836-154866141 (+)
C3H/HeJ	MGP_C3HHeJ_G0010300	pseudogene	Chr1:159217229-159217534 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0010639	pseudogene	Chr1:166323235-166323540 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009409	pseudogene	Chr10:22494405-22494713 (-)
CAST/EiJ	MGP_CASTEiJ_G0010119	pseudogene	Chr1:158750428-158750733 (+)
CBA/J	MGP_CBAJ_G0010269	pseudogene	Chr1:172177578-172177883 (+)
DBA/2J	MGP_DBA2J_G0010301	pseudogene	Chr1:153329462-153329767 (+)
FVB/NJ	MGP_FVBNJ_G0010326	pseudogene	Chr1:151790122-151790427 (+)
LP/J	MGP_LPJ_G0010385	pseudogene	Chr1:161956384-161956689 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010283	pseudogene	Chr1:179773234-179773539 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0010604	pseudogene	Chr1:158895019-158895324 (+)
PWK/PhJ	MGP_PWKPhJ_G0010023	pseudogene	Chr1:152397563-152397868 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0009836	pseudogene	Chr1:157635456-157635766 (+)
WSB/EiJ	MGP_WSBEiJ_G0010189	pseudogene	Chr1:158981793-158982098 (+)

Homology

• Gene Tree
  Gm36934
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  2
• Genomic Mutations
  2 involving Gm36934
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000103771 (Evidence)
• NCBI Gene
  115487473

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000103771	Ensembl Gene Model | MGI Sequence Detail	306	C57BL/6J
transcript	ENSMUST00000192007	Ensembl | MGI Sequence Detail	306	Not Applicable

References

• Summaries
  All 5

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;