Gm36984 Pseudogene Detail

Summary

• Symbol
  Gm36984
• Name
  predicted gene, 36984

• Feature Type
  pseudogene
• IDs
  MGI:5610212
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:34649653-34649887 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  178 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5610212	pseudogene	Chr1:34649653-34649887 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0010069	pseudogene	Chr1:33014608-33014842 (-)
A/J	MGP_AJ_G0010057	pseudogene	Chr1:32218048-32218282 (-)
AKR/J	MGP_AKRJ_G0010039	pseudogene	Chr1:32626535-32626769 (-)
BALB/cJ	MGP_BALBcJ_G0010044	pseudogene	Chr1:31885309-31885543 (-)
C3H/HeJ	MGP_C3HHeJ_G0009977	pseudogene	Chr1:32831336-32831570 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0010293	pseudogene	Chr1:34524621-34524855 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0009812	pseudogene	Chr1:32695624-32697493 (-)
CBA/J	MGP_CBAJ_G0009949	pseudogene	Chr1:35500574-35500808 (-)
DBA/2J	MGP_DBA2J_G0009971	pseudogene	Chr1:31573229-31573463 (-)
FVB/NJ	MGP_FVBNJ_G0009998	pseudogene	Chr1:31103604-31103838 (-)
LP/J	MGP_LPJ_G0010061	pseudogene	Chr1:33364340-33364574 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0009954	pseudogene	Chr1:37748313-37748547 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0010269	pseudogene	Chr1:32631327-32631561 (-)
PWK/PhJ	MGP_PWKPhJ_G0009721	pseudogene	Chr1:31289958-31290192 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0009535	pseudogene	Chr1:32600642-32600877 (-)
WSB/EiJ	MGP_WSBEiJ_G0009876	pseudogene	Chr1:32612073-32612307 (-)

Homology

• Gene Tree
  Gm36984
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm36984
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000102499 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000102499	Ensembl Gene Model | MGI Sequence Detail	235	C57BL/6J
transcript	ENSMUST00000192770	Ensembl | MGI Sequence Detail	235	Not Applicable

References

• Summaries
  All 3

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;