Gm36988 Gene Detail

Summary

• Symbol
  Gm36988
• Name
  predicted gene, 36988

• Feature Type
  lncRNA gene
• IDs
  MGI:5610216
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr2:4321290-4323697 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  210 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5610216	lncRNA gene	Chr2:4321290-4323697 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0036934	sense intronic lncRNA gene	Chr2:1346646-1349090 (+)
A/J	MGP_AJ_G0036922	sense intronic lncRNA gene	Chr2:1286733-1289140 (+)
AKR/J	MGP_AKRJ_G0036869	sense intronic lncRNA gene	Chr2:1309543-1311950 (+)
BALB/cJ	MGP_BALBcJ_G0036913	sense intronic lncRNA gene	Chr2:1258150-1260557 (+)
C3H/HeJ	MGP_C3HHeJ_G0036599	sense intronic lncRNA gene	Chr2:1301517-1303924 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0037426	sense intronic lncRNA gene	Chr2:1351114-1353521 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0034485	sense intronic lncRNA gene	Chr2:1152185-1154531 (+)
CAST/EiJ	MGP_CASTEiJ_G0035788	sense intronic lncRNA gene	Chr2:1296367-1298557 (+)
CBA/J	MGP_CBAJ_G0036574	sense intronic lncRNA gene	Chr2:1408616-1410753 (+)
DBA/2J	MGP_DBA2J_G0036750	sense intronic lncRNA gene	Chr2:1252028-1254435 (+)
FVB/NJ	MGP_FVBNJ_G0036700	sense intronic lncRNA gene	Chr2:1251817-1254215 (+)
LP/J	MGP_LPJ_G0036797	sense intronic lncRNA gene	Chr2:1336906-1339368 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0036707	sense intronic lncRNA gene	Chr2:1351036-1353443 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0037543	sense intronic lncRNA gene	Chr2:1306046-1308453 (+)
PWK/PhJ	MGP_PWKPhJ_G0035481	sense intronic lncRNA gene	Chr2:1229374-1231877 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0035293	sense intronic lncRNA gene	Chr2:1314489-1316623 (+)
WSB/EiJ	MGP_WSBEiJ_G0035988	sense intronic lncRNA gene	Chr2:1314954-1317361 (+)

Homology

• Gene Tree
  Gm36988
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000102494 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000102494	Ensembl Gene Model | MGI Sequence Detail	2408	C57BL/6J
transcript	ENSMUST00000194090	Ensembl | MGI Sequence Detail	2408	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;