Gm37119 Pseudogene Detail

Summary

• Symbol
  Gm37119
• Name
  predicted gene, 37119

• Feature Type
  pseudogene
• IDs
  MGI:5610347
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:163859529-163859917 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  100 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5610347	pseudogene	Chr1:163859529-163859917 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0010420	pseudogene	Chr1:169442857-169443245 (+)
A/J	MGP_AJ_G0010409	pseudogene	Chr1:162541492-162541880 (+)
AKR/J	MGP_AKRJ_G0010377	pseudogene	Chr1:167472618-167473006 (+)
BALB/cJ	MGP_BALBcJ_G0010384	pseudogene	Chr1:163042638-163043026 (+)
C3H/HeJ	MGP_C3HHeJ_G0010317	pseudogene	Chr1:167655490-167655878 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0010658	pseudogene	Chr1:175145507-175145895 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009337	pseudogene	Chr1:154528695-154529083 (+)
CAST/EiJ	MGP_CASTEiJ_G0010137	pseudogene	Chr1:167291850-167292238 (+)
CBA/J	MGP_CBAJ_G0010286	pseudogene	Chr1:181374267-181374655 (+)
DBA/2J	no annotation
FVB/NJ	MGP_FVBNJ_G0010343	pseudogene	Chr1:159888461-159888849 (+)
LP/J	MGP_LPJ_G0010402	pseudogene	Chr1:170525381-170525769 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010300	pseudogene	Chr1:188888940-188889328 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0010622	pseudogene	Chr1:167299051-167299439 (+)
PWK/PhJ	no annotation
SPRET/EiJ	MGP_SPRETEiJ_G0009854	pseudogene	Chr1:166175811-166176199 (+)
WSB/EiJ	MGP_WSBEiJ_G0010207	pseudogene	Chr1:167463843-167464231 (+)

Homology

• Gene Tree
  Gm37119
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  2
• Genomic Mutations
  2 involving Gm37119
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  18

• Ensembl
  ENSMUSG00000103960 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000103960	Ensembl Gene Model | MGI Sequence Detail	389	C57BL/6J
transcript	ENSMUST00000195691	Ensembl | MGI Sequence Detail	389	Not Applicable

References

• Summaries
  All 3

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;