Gm37239 Pseudogene Detail

Summary

• Symbol
  Gm37239
• Name
  predicted gene, 37239

• Feature Type
  pseudogene
• IDs
  MGI:5610467
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:189417525-189417665 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  119 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5610467	pseudogene	Chr1:189417525-189417665 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0010473	pseudogene	Chr1:196598429-196598569 (+)
A/J	MGP_AJ_G0010462	pseudogene	Chr1:188558379-188558519 (+)
AKR/J	MGP_AKRJ_G0010428	pseudogene	Chr1:194111741-194111881 (+)
BALB/cJ	MGP_BALBcJ_G0010436	pseudogene	Chr1:189234162-189234302 (+)
C3H/HeJ	MGP_C3HHeJ_G0010367	pseudogene	Chr1:194981332-194981472 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0010708	pseudogene	Chr1:202878767-202878907 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011426	pseudogene	Chr4:114493682-114493821 (+)
CAST/EiJ	MGP_CASTEiJ_G0010186	pseudogene	Chr1:194553948-194554088 (+)
CBA/J	MGP_CBAJ_G0010333	pseudogene	Chr1:210438658-210438798 (+)
DBA/2J	MGP_DBA2J_G0010365	pseudogene	Chr1:187299900-187300040 (+)
FVB/NJ	MGP_FVBNJ_G0010388	pseudogene	Chr1:185411500-185411640 (+)
LP/J	MGP_LPJ_G0010454	pseudogene	Chr1:197779745-197779885 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010353	pseudogene	Chr1:217165648-217165788 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0010680	pseudogene	Chr1:194028180-194028320 (+)
PWK/PhJ	MGP_PWKPhJ_G0010089	pseudogene	Chr1:186558227-186558367 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0009904	pseudogene	Chr1:192999857-192999997 (+)
WSB/EiJ	MGP_WSBEiJ_G0010257	pseudogene	Chr1:194226096-194226236 (+)

Homology

• Gene Tree
  Gm37239
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000103374 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000103374	Ensembl Gene Model | MGI Sequence Detail	141	C57BL/6J
transcript	ENSMUST00000193510	Ensembl | MGI Sequence Detail	141	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;