Gm37313 Pseudogene Detail

Summary

• Symbol
  Gm37313
• Name
  predicted gene, 37313

• Feature Type
  pseudogene
• IDs
  MGI:5610541
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:177817228-177826305 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  470 from dbSNP Build 142
• Strain Annotations
  13

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5610541	pseudogene	Chr1:177817228-177826305 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0039939	pseudogene	Chr1:184224592-184235674 (-)
A/J	no annotation
AKR/J	MGP_AKRJ_G0039867	pseudogene	Chr1:182092207-182108121 (-)
BALB/cJ	MGP_BALBcJ_G0039923	pseudogene	Chr1:177363660-177373162 (-)
C3H/HeJ	MGP_C3HHeJ_G0039571	pseudogene	Chr1:182756816-182765922 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0040499	pseudogene	Chr1:190246755-190261185 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0038681	pseudogene	Chr1:182072312-182091732 (-)
CBA/J	MGP_CBAJ_G0039539	pseudogene	Chr1:197234948-197235190 (-)
DBA/2J	MGP_DBA2J_G0039737	pseudogene	Chr1:175677931-175687252 (-)
FVB/NJ	MGP_FVBNJ_G0039700	pseudogene	Chr1:173537514-173567386 (-)
LP/J	MGP_LPJ_G0039777	pseudogene	Chr1:185466800-185491543 (-)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	MGP_SPRETEiJ_G0038087	pseudogene	Chr1:180744147-180753376 (-)
WSB/EiJ	MGP_WSBEiJ_G0038899	pseudogene	Chr1:182053080-182053323 (-)

Homology

• Gene Tree
  Gm37313
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  2
• Genomic Mutations
  2 involving Gm37313
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  15

• Ensembl
  ENSMUSG00000104097 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000104097	Ensembl Gene Model | MGI Sequence Detail	9078	C57BL/6J
transcript	ENSMUST00000191673	Ensembl | MGI Sequence Detail	290	Not Applicable

References

• Summaries
  All 3

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;