Gm37963 Gene Detail

Summary

• Symbol
  Gm37963
• Name
  predicted gene, 37963

• Feature Type
  lncRNA gene
• IDs
  MGI:5611191
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr9:108266281-108267404 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  132 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5611191	lncRNA gene	Chr9:108266281-108267404 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0037096	sense intronic lncRNA gene	Chr9:110341830-110345194 (+)
A/J	MGP_AJ_G0037083	sense intronic lncRNA gene	Chr9:106299764-106300887 (+)
AKR/J	MGP_AKRJ_G0037031	sense intronic lncRNA gene	Chr9:108956157-108957280 (+)
BALB/cJ	MGP_BALBcJ_G0037074	sense intronic lncRNA gene	Chr9:105996099-105997222 (+)
C3H/HeJ	MGP_C3HHeJ_G0036761	sense intronic lncRNA gene	Chr9:109349167-109350290 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0037588	sense intronic lncRNA gene	Chr9:113342607-113343730 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0035948	sense intronic lncRNA gene	Chr9:109319868-109320997 (+)
CBA/J	MGP_CBAJ_G0036736	sense intronic lncRNA gene	Chr9:117345660-117346787 (+)
DBA/2J	MGP_DBA2J_G0036911	sense intronic lncRNA gene	Chr9:105755489-105756612 (+)
FVB/NJ	MGP_FVBNJ_G0036861	sense intronic lncRNA gene	Chr9:104521413-104523101 (+)
LP/J	MGP_LPJ_G0036959	sense intronic lncRNA gene	Chr9:110540892-110542015 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0036869	sense intronic lncRNA gene	Chr9:118919650-118920773 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0037705	sense intronic lncRNA gene	Chr9:109243908-109245031 (+)
PWK/PhJ	MGP_PWKPhJ_G0035642	sense intronic lncRNA gene	Chr9:106083268-106084395 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0035450	sense intronic lncRNA gene	Chr9:109296665-109297879 (+)
WSB/EiJ	MGP_WSBEiJ_G0036150	sense intronic lncRNA gene	Chr9:109124436-109125566 (+)

Homology

• Gene Tree
  Gm37963
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000104399 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000104399	Ensembl Gene Model | MGI Sequence Detail	1124	C57BL/6J
transcript	ENSMUST00000195351	Ensembl | MGI Sequence Detail	613	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;