Gm37994 Pseudogene Detail

Summary

• Symbol
  Gm37994
• Name
  predicted gene, 37994

• Feature Type
  pseudogene
• IDs
  MGI:5611222
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:167013549-167013957 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  123 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5611222	pseudogene	Chr1:167013549-167013957 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0010431	pseudogene	Chr1:172740152-172740560 (-)
A/J	MGP_AJ_G0010421	pseudogene	Chr1:165694449-165694857 (-)
AKR/J	MGP_AKRJ_G0010389	pseudogene	Chr1:170710567-170710975 (-)
BALB/cJ	MGP_BALBcJ_G0010396	pseudogene	Chr1:166178460-166178868 (-)
C3H/HeJ	MGP_C3HHeJ_G0010327	pseudogene	Chr1:170935867-170936275 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0010669	pseudogene	Chr1:178524691-178525099 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009348	pseudogene	Chr1:157544130-157544890 (-)
CAST/EiJ	MGP_CASTEiJ_G0010148	pseudogene	Chr1:170535245-170535653 (-)
CBA/J	MGP_CBAJ_G0010297	pseudogene	Chr1:184859110-184859518 (-)
DBA/2J	MGP_DBA2J_G0010327	pseudogene	Chr1:164540980-164541388 (-)
FVB/NJ	MGP_FVBNJ_G0010353	pseudogene	Chr1:162984938-162985346 (-)
LP/J	MGP_LPJ_G0010414	pseudogene	Chr1:173813794-173814202 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010311	pseudogene	Chr1:192248012-192248420 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0010634	pseudogene	Chr1:170573037-170573445 (-)
PWK/PhJ	MGP_PWKPhJ_G0010050	pseudogene	Chr1:163745766-163746174 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0009864	pseudogene	Chr1:169341155-169341563 (-)
WSB/EiJ	MGP_WSBEiJ_G0010217	pseudogene	Chr1:170664839-170665247 (-)

Homology

• Gene Tree
  Gm37994
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  2
• Genomic Mutations
  2 involving Gm37994
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000103333 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000103333	Ensembl Gene Model | MGI Sequence Detail	409	C57BL/6J
transcript	ENSMUST00000192124	Ensembl | MGI Sequence Detail	409	Not Applicable

References

• Summaries
  All 3

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;