Gm38051 Pseudogene Detail

Summary

• Symbol
  Gm38051
• Name
  predicted gene, 38051

• Feature Type
  pseudogene
• IDs
  MGI:5611279
  NCBI Gene: 108167607
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:172609012-172609444 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  142 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5611279	pseudogene	Chr1:172580502-172611218 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0010443	pseudogene	Chr1:178654437-178654867 (+)
A/J	MGP_AJ_G0010432	pseudogene	Chr1:171354724-171355154 (+)
AKR/J	MGP_AKRJ_G0010401	pseudogene	Chr1:176523216-176523646 (+)
BALB/cJ	MGP_BALBcJ_G0010408	pseudogene	Chr1:171887928-171888358 (+)
C3H/HeJ	MGP_C3HHeJ_G0010339	pseudogene	Chr1:177096049-177096479 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0010682	pseudogene	Chr1:184586417-184586849 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009360	pseudogene	Chr1:163043581-163044014 (+)
CAST/EiJ	MGP_CASTEiJ_G0010160	pseudogene	Chr1:176472315-176472747 (+)
CBA/J	MGP_CBAJ_G0010307	pseudogene	Chr1:191163658-191164088 (+)
DBA/2J	MGP_DBA2J_G0010338	pseudogene	Chr1:170280105-170280535 (+)
FVB/NJ	MGP_FVBNJ_G0010363	pseudogene	Chr1:168527853-168528283 (+)
LP/J	MGP_LPJ_G0010426	pseudogene	Chr1:179730445-179730875 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010325	pseudogene	Chr1:198368908-198369338 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0010649	pseudogene	Chr1:176405395-176405825 (+)
PWK/PhJ	MGP_PWKPhJ_G0010062	pseudogene	Chr1:169661981-169662411 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0009875	pseudogene	Chr1:175372482-175372912 (+)
WSB/EiJ	MGP_WSBEiJ_G0010232	pseudogene	Chr1:176554553-176554983 (+)

Homology

• Gene Tree
  Gm38051
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  2
• Genomic Mutations
  2 involving Gm38051
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000102430 (Evidence)
• NCBI Gene
  108167607

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000102430	Ensembl Gene Model | MGI Sequence Detail	433	C57BL/6J
transcript	ENSMUST00000193740	Ensembl | MGI Sequence Detail	433	Not Applicable

References

• Summaries
  All 5

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;