About   Help   FAQ
Gm38097 Gene Detail
Summary
  • Symbol
    Gm38097
  • Name
    predicted gene, 38097
  • Feature Type
    lncRNA gene
  • IDs
    MGI:5611325
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr18:37305179-37305617 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 18, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    105 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5611325
 lncRNA gene Chr18:37305179-37305617 (-)
129S1/SvImJ MGP_129S1SvImJ_G0003441
 antisense lncRNA gene Chr18:35567702-35568140 (-)
A/J MGP_AJ_G0003420
 antisense lncRNA gene Chr18:34341970-34342408 (-)
AKR/J MGP_AKRJ_G0003400
 antisense lncRNA gene Chr18:35297862-35298300 (-)
BALB/cJ MGP_BALBcJ_G0003409
 antisense lncRNA gene Chr18:34390817-34391255 (-)
C3H/HeJ MGP_C3HHeJ_G0003358
 antisense lncRNA gene Chr18:35342614-35343052 (-)
C57BL/6NJ MGP_C57BL6NJ_G0003547
 antisense lncRNA gene Chr18:36852117-36852555 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0003062
 antisense lncRNA gene Chr18:34420624-34421058 (-)
CAST/EiJ MGP_CASTEiJ_G0003321
 antisense lncRNA gene Chr18:35340569-35341007 (-)
CBA/J MGP_CBAJ_G0003355
 antisense lncRNA gene Chr18:37930333-37930771 (-)
DBA/2J MGP_DBA2J_G0003364
 antisense lncRNA gene Chr18:33948179-33948617 (-)
FVB/NJ MGP_FVBNJ_G0003381
 antisense lncRNA gene Chr18:33674026-33674464 (-)
LP/J MGP_LPJ_G0003435
 antisense lncRNA gene Chr18:35661393-35661831 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0003369
 antisense lncRNA gene Chr18:39203368-39203806 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0003550
 antisense lncRNA gene Chr18:35165083-35165521 (-)
PWK/PhJ MGP_PWKPhJ_G0003278
 antisense lncRNA gene Chr18:34187844-34188282 (-)
SPRET/EiJ MGP_SPRETEiJ_G0003223
 antisense lncRNA gene Chr18:35426228-35426657 (-)
WSB/EiJ MGP_WSBEiJ_G0003355
 antisense lncRNA gene Chr18:35066175-35066613 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    20
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000103456 Ensembl Gene Model | MGI Sequence Detail 439 C57BL/6J ±  kb
transcript ENSMUST00000192936 Ensembl | MGI Sequence Detail 439 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 3
    Phenotypes 2
  • Earliest
    J:244163 Hasegawa S, et al., Distinct and Cooperative Functions for the Protocadherin-alpha, -beta and -gamma Clusters in Neuronal Survival and Axon Targeting. Front Mol Neurosci. 2016;9:155
  • Latest
    J:313451 Xu L, et al., Abnormal neocortex arealization and Sotos-like syndrome-associated behavior in Setd2 mutant mice. Sci Adv. 2021 Jan;7(1)
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory