Gm38144 Gene Detail

Summary

• Symbol
  Gm38144
• Name
  predicted gene, 38144

• Feature Type
  unclassified gene
• IDs
  MGI:5611372
• Alliance
  gene page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr15:96598008-96598521 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  69 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5611372	unclassified gene	Chr15:96598008-96598521 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0000902	unclassified gene	Chr15:98301338-98301802 (+)
A/J	MGP_AJ_G0000878	unclassified gene	Chr15:94446867-94447331 (+)
AKR/J	MGP_AKRJ_G0000867	unclassified gene	Chr15:97290630-97291094 (+)
BALB/cJ	MGP_BALBcJ_G0000870	unclassified gene	Chr15:94653460-94653924 (+)
C3H/HeJ	MGP_C3HHeJ_G0000854	unclassified gene	Chr15:97331803-97332267 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0000986	unclassified gene	Chr15:101934207-101934671 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0000720	unclassified gene	Chr15:90434694-90435161 (+)
CAST/EiJ	MGP_CASTEiJ_G0000846	unclassified gene	Chr15:98214475-98214939 (+)
CBA/J	MGP_CBAJ_G0000846	unclassified gene	Chr15:105340864-105341328 (+)
DBA/2J	MGP_DBA2J_G0000850	unclassified gene	Chr15:93885313-93885777 (+)
FVB/NJ	MGP_FVBNJ_G0000862	unclassified gene	Chr15:92883132-92883596 (+)
LP/J	MGP_LPJ_G0000905	unclassified gene	Chr15:98422670-98423134 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0000854	unclassified gene	Chr15:109536936-109537400 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0000980	unclassified gene	Chr15:97416940-97417404 (+)
PWK/PhJ	MGP_PWKPhJ_G0000801	unclassified gene	Chr15:93971691-93972155 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0000773	unclassified gene	Chr15:97219891-97220345 (+)
WSB/EiJ	MGP_WSBEiJ_G0000854	unclassified gene	Chr15:97936278-97936742 (+)

Homology

• Gene Tree
  Gm38144
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Gene trapped
  1
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000102385 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000102385	Ensembl Gene Model | MGI Sequence Detail	514	C57BL/6J

References

• Summaries
  All 3

  Phenotypes 2
• Earliest
  J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9

TSS for Gm38144:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr132844	Chr15:96596914-96596925 (+)	-1,088 bp
Tssr132845	Chr15:96597965-96597974 (+)	-38 bp