Gm38311 Pseudogene Detail

Summary

• Symbol
  Gm38311
• Name
  predicted gene, 38311

• Feature Type
  pseudogene
• IDs
  MGI:5611539
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr3:14395287-14395451 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  181 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5611539	pseudogene	Chr3:14395287-14395451 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0012036	pseudogene	Chr3:11428511-11428645 (+)
A/J	MGP_AJ_G0012027	pseudogene	Chr3:11445490-11445624 (+)
AKR/J	MGP_AKRJ_G0011990	pseudogene	Chr3:11581961-11582100 (+)
BALB/cJ	MGP_BALBcJ_G0012004	pseudogene	Chr3:11167680-11167814 (+)
C3H/HeJ	MGP_C3HHeJ_G0011882	pseudogene	Chr3:11741673-11741812 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0012309	pseudogene	Chr3:12228980-12229144 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010750	pseudogene	Chr3:9925380-9925519 (+)
CAST/EiJ	MGP_CASTEiJ_G0011665	pseudogene	Chr3:11903516-11903655 (+)
CBA/J	MGP_CBAJ_G0011857	pseudogene	Chr3:12593281-12593420 (+)
DBA/2J	MGP_DBA2J_G0011907	pseudogene	Chr3:11007370-11007509 (+)
FVB/NJ	MGP_FVBNJ_G0011917	pseudogene	Chr3:10842355-10842489 (+)
LP/J	MGP_LPJ_G0011984	pseudogene	Chr3:11981755-11981889 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0011918	pseudogene	Chr3:14159937-14160071 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0012316	pseudogene	Chr3:11258039-11258203 (+)
PWK/PhJ	MGP_PWKPhJ_G0011513	pseudogene	Chr3:11279626-11279765 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0011328	pseudogene	Chr3:11433331-11433470 (+)
WSB/EiJ	MGP_WSBEiJ_G0011686	pseudogene	Chr3:11294233-11294367 (+)

Homology

• Gene Tree
  Gm38311
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000102707 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000102707	Ensembl Gene Model | MGI Sequence Detail	165	C57BL/6J
transcript	ENSMUST00000192945	Ensembl | MGI Sequence Detail	165	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;