Gm38426 Gene Detail

Summary

• Symbol
  Gm38426
• Name
  predicted gene, 38426

• Feature Type
  lncRNA gene
• IDs
  MGI:5621311
  NCBI Gene: 100503676
• Alliance
  gene page
• Transcription Start Sites
  4 TSS

Location &
Maps

• Sequence Map
  Chr8:85639964-85649544 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  238 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5621311	lncRNA gene	Chr8:85639964-85649544 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  33 phenotype references
  

• All Mutations and Alleles
  6
• Chemically induced (other)
  1
• Gene trapped
  4
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm38426
• Find Mice (IMSR)
  1 strains or lines available

Expression

• Other Mouse Links
  GEO

Sequences &
Gene Models

• All Sequences
  3
• RefSeq
  1

• NCBI Gene
  100503676

Representative Sequences			Length	Strain/Species
genomic	100503676	NCBI Gene Model | MGI Sequence Detail	9581	C57BL/6J
transcript	NR_103491	RefSeq | MGI Sequence Detail	1174	Not Specified

References

• Summaries
  All 35

  Phenotypes 33
• Earliest
  J:13049 Gruneberg H, Genetical studies on the skeleton of the mouse. XVIII. Three genes for syndactylism. J Genet. 1956;54(1):113-145
• Latest
  J:348117 Okuma H, et al., N-terminal domain on dystroglycan enables LARGE1 to extend matriglycan on alpha-dystroglycan and prevents muscular dystrophy. Elife. 2023 Feb 1;12

TSS for Gm38426:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr78469	Chr8:85637963-85637978 (+)	-1,993 bp
Tssr78470	Chr8:85639949-85639982 (+)	2 bp
Tssr78471	Chr8:85639998-85640043 (+)	57 bp
Tssr78472	Chr8:85640052-85640067 (+)	96 bp