Gm38490 Gene Detail

Summary

• Symbol
  Gm38490
• Name
  predicted gene, 38490

• Feature Type
  protein coding gene
• IDs
  MGI:5621375
  NCBI Gene: 102636631
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr16:88889022-88889237 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  70 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5621375	protein coding gene	Chr16:88889022-88889237 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  15 phenotype references
  

• All Mutations and Alleles
  3
• Targeted
  2
• Genomic Mutations
  3 involving Gm38490
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  4
• RefSeq
  2

• NCBI Gene
  102636631

Representative Sequences			Length	Strain/Species
genomic	102636631	NCBI Gene Model | MGI Sequence Detail	216	C57BL/6J
transcript	XM_006523118	RefSeq | MGI Sequence Detail	216	C57BL/6J
polypeptide	XP_006523181	RefSeq | MGI Sequence Detail	71	C57BL/6J

References

• Summaries
  All 17

  Diseases 1

  Phenotypes 15
• Earliest
  J:117029 Davisson M, et al., Impact of trisomy on fertility and meiosis in male mice. Hum Reprod. 2007 Feb;22(2):468-76
• Latest
  J:345472 Lana-Elola E, et al., Increased dosage of DYRK1A leads to congenital heart defects in a mouse model of Down syndrome. Sci Transl Med. 2024 Jan 24;16(731):eadd6883

TSS for Gm38490:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr139251	Chr16:88888983-88888993 (+)	-34 bp