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Gm38505 Gene Detail
Summary
  • Symbol
    Gm38505
  • Name
    predicted gene, 38505
  • Synonyms
    Gm20446, Gm20514
  • Feature Type
    lncRNA gene
  • IDs
    MGI:5621390
    NCBI Gene: 102638008
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:34352322-34405847 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 3, 16.74 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    1515 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5621390
 lncRNA gene Chr3:34352321-34405861 (-)
129S1/SvImJ MGP_129S1SvImJ_G0006148
 lincRNA gene Chr3:31955536-32015923 (-)
A/J MGP_AJ_G0006140
 lincRNA gene Chr3:31458125-31513360 (-)
AKR/J MGP_AKRJ_G0006116
 lincRNA gene Chr3:31991751-32046201 (-)
BALB/cJ MGP_BALBcJ_G0006117
 lincRNA gene Chr3:31106052-31162120 (-)
C3H/HeJ MGP_C3HHeJ_G0006066
 lincRNA gene Chr3:32034575-32091445 (-)
C57BL/6NJ MGP_C57BL6NJ_G0006278
 lincRNA gene Chr3:33550638-33613833 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0005591
 lincRNA gene Chr3:29228048-29282450 (-)
CAST/EiJ MGP_CASTEiJ_G0006001
 lincRNA gene Chr3:31873739-31932658 (-)
CBA/J MGP_CBAJ_G0006051
 lincRNA gene Chr3:34424118-34479794 (-)
DBA/2J MGP_DBA2J_G0006071
 lincRNA gene Chr3:30933334-30987562 (-)
FVB/NJ MGP_FVBNJ_G0006094
 lincRNA gene Chr3:30380815-30436342 (-)
LP/J MGP_LPJ_G0006152
 lincRNA gene Chr3:32737947-32793829 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0006084
 lincRNA gene Chr3:36924440-36981617 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0006282
 lincRNA gene Chr3:31787842-31841200 (-)
PWK/PhJ MGP_PWKPhJ_G0005946
 lincRNA gene Chr3:30500542-30555091 (-)
SPRET/EiJ MGP_SPRETEiJ_G0005855
 lincRNA gene Chr3:31197580-31253978 (-)
WSB/EiJ MGP_WSBEiJ_G0006048
 lincRNA gene Chr3:31814676-31865879 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    23
  • RefSeq
    2
Representative SequencesLengthStrain/SpeciesFlank
genomic 102638008 NCBI Gene Model | MGI Sequence Detail 53526 C57BL/6J ±  kb
transcript NR_166362 RefSeq | MGI Sequence Detail 1447 C57BL/6  
For the selected sequence
Other
Accession IDs
less
MGI:5141911, MGI:5141979
References
more
  • Summaries
    All 6
    Phenotypes 1
  • Earliest
    J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
  • Latest
    J:141210 Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI), Mouse Gene Trap Data Load from dbGSS. Database Download. 2008;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
10/22/2024
MGI 6.24 		The Jackson Laboratory