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Gm16226 Gene Detail
Summary
  • Symbol
    Gm16226
  • Name
    predicted gene 16226
  • Feature Type
    lncRNA gene
  • IDs
    MGI:3801792
    NCBI Gene: 102638080
  • Alliance
    gene page
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr5:99830280-99863633 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    1038 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3801792
 lncRNA gene Chr5:99830269-99863633 (+)
129S1/SvImJ MGP_129S1SvImJ_G0004119
 antisense lncRNA gene Chr5:101093453-101128908 (+)
A/J MGP_AJ_G0004100
 antisense lncRNA gene Chr5:97356922-97390819 (+)
AKR/J MGP_AKRJ_G0004079
 antisense lncRNA gene Chr5:100567418-100602480 (+)
BALB/cJ MGP_BALBcJ_G0004086
 antisense lncRNA gene Chr5:98375853-98409940 (+)
C3H/HeJ MGP_C3HHeJ_G0004033
 antisense lncRNA gene Chr5:100894656-100929774 (+)
C57BL/6NJ MGP_C57BL6NJ_G0004234
 antisense lncRNA gene Chr5:105340688-105375145 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0003710
 antisense lncRNA gene Chr5:92640126-92675910 (+)
CAST/EiJ MGP_CASTEiJ_G0003996
 antisense lncRNA gene Chr5:99555355-99592577 (+)
CBA/J MGP_CBAJ_G0004027
 antisense lncRNA gene Chr5:108942101-108985033 (+)
DBA/2J MGP_DBA2J_G0004042
 antisense lncRNA gene Chr5:97544469-97578587 (+)
FVB/NJ MGP_FVBNJ_G0004060
 antisense lncRNA gene Chr5:96361139-96394915 (+)
LP/J MGP_LPJ_G0004121
 antisense lncRNA gene Chr5:101718070-101753377 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0004049
 antisense lncRNA gene Chr5:114071437-114105966 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0004230
 antisense lncRNA gene Chr5:100032752-100070791 (+)
PWK/PhJ MGP_PWKPhJ_G0003949
 antisense lncRNA gene Chr5:95991056-96025423 (+)
SPRET/EiJ MGP_SPRETEiJ_G0003893
 antisense lncRNA gene Chr5:97742842-97776523 (+)
WSB/EiJ MGP_WSBEiJ_G0004031
 antisense lncRNA gene Chr5:100361410-100397217 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
  • All Mutations and Alleles
    3
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Spontaneous
    1
  • Genomic Mutations
    3 involving Gm16226
  • Find Mice (IMSR)
    0 strains or lines available
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    8
Sequences &
Gene Models
less
  • All Sequences
    31
  • RefSeq
    3
Representative SequencesLengthStrain/SpeciesFlank
genomic 102638080 NCBI Gene Model | MGI Sequence Detail 33354 C57BL/6J ±  kb
transcript NR_168095 RefSeq | MGI Sequence Detail 749 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 8
    cDNA 8

    Microarray probesets 3
Other
Accession IDs
less
MGI:5621576
References
more
  • Summaries
    All 18
    Phenotypes 6
  • Earliest
    J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
  • Latest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory