Gm38910 Gene Detail

Summary

• Symbol
  Gm38910
• Name
  predicted gene, 38910
• Synonyms
  Gm43949

• Feature Type
  lncRNA gene
• IDs
  MGI:5621795
  NCBI Gene: 105242797
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr6:134582197-134584644 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  2 experiments

Strain
Comparison

• SNPs within 2kb
  213 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5621795	lncRNA gene	Chr6:134582197-134584644 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0007078	lincRNA gene	Chr6:138873371-138875818 (-)
A/J	MGP_AJ_G0007075	lincRNA gene	Chr6:133441052-133443486 (-)
AKR/J	MGP_AKRJ_G0007043	lincRNA gene	Chr6:137483952-137486386 (-)
BALB/cJ	MGP_BALBcJ_G0007050	lincRNA gene	Chr6:133255696-133258139 (-)
C3H/HeJ	MGP_C3HHeJ_G0006995	lincRNA gene	Chr6:137532499-137534933 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0007216	lincRNA gene	Chr6:142641805-142644252 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0006441	lincRNA gene	Chr6:132585637-132588066 (-)
CAST/EiJ	MGP_CASTEiJ_G0006903	lincRNA gene	Chr6:136921191-136923621 (-)
CBA/J	MGP_CBAJ_G0006975	lincRNA gene	Chr6:147976704-147979138 (-)
DBA/2J	MGP_DBA2J_G0006997	lincRNA gene	Chr6:132285836-132288270 (-)
FVB/NJ	MGP_FVBNJ_G0007020	lincRNA gene	Chr6:131205868-131208313 (-)
LP/J	MGP_LPJ_G0007081	lincRNA gene	Chr6:138994005-138996452 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0007000	lincRNA gene	Chr6:152025505-152027939 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0007222	lincRNA gene	Chr6:137227001-137229436 (-)
PWK/PhJ	MGP_PWKPhJ_G0006845	lincRNA gene	Chr6:130770045-130772539 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0006756	lincRNA gene	Chr6:135391888-135394319 (-)
WSB/EiJ	MGP_WSBEiJ_G0006962	lincRNA gene	Chr6:137855174-137857617 (-)

Homology

• Gene Tree
  Gm38910
  

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000107728 (Evidence)
• NCBI Gene
  105242797

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000107728	Ensembl Gene Model | MGI Sequence Detail	2448	C57BL/6J
transcript	ENSMUST00000204630	Ensembl | MGI Sequence Detail	2448	Not Applicable

Molecular
Reagents

• All nucleic 1

  cDNA 1

Other
Accession IDs

MGI:5690341

References

• Summaries
  All 5
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;