Krtap5-23 Gene Detail

Summary

• Symbol
  Krtap5-23
• Name
  keratin associated protein 5-23
• Synonyms
  Gm39115

• Feature Type
  protein coding gene
• IDs
  MGI:5622000
  NCBI Gene: 105243089
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr7:141689073-141689771 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  118 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5622000	protein coding gene	Chr7:141688680-141689820 (-)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Human Ortholog
  KRTAP5-8, keratin associated protein 5-8

• Vertebrate Orthologs
  1

Vertebrate Orthology Source

Alliance of Genome Resources

• Human Ortholog
  KRTAP5-8, keratin associated protein 5-8
  
• Synonyms
  KRTAP5-2, KRTAP5.8, UHSKerB
• Links
  HGNC:23603

  NCBI Gene ID: 57830

  neXtProt AC: NX_O75690

  UniProt: O75690

  
  
• Chr Location
  11q13.4; chr11:71538025-71539209 (+)  GRCh38

---

• MGI Vertebrate Homology
  Krtap5-23 stringent orthology
  1 human;1 mouse
  
• HCOP
  vertebrate homology predictions: KRTAP5-8
• Gene Tree
  Krtap5-23
  

Expression

• Assay Results
  706
• cDNA Data
  2

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  10
• RefSeq
  2
• UniProt
  1
• CCDS
  CCDS85463.1

• Ensembl
  ENSMUSG00000110091 (Evidence)
• NCBI Gene
  105243089

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000110091	Ensembl Gene Model | MGI Sequence Detail	699	C57BL/6J
transcript	ENSMUST00000211350	Ensembl | MGI Sequence Detail	699	Not Applicable
polypeptide	ENSMUSP00000147940	Ensembl | MGI Sequence Detail	232	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 2

  cDNA 2

Other
Accession IDs

MGI:7580785

References

• Summaries
  All 7
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:155721 Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI), Consensus CDS project. Database Download. 2010;