Gm42228 Gene Detail

Summary

• Symbol
  Gm42228
• Name
  predicted gene, 42228

• Feature Type
  lncRNA gene
• IDs
  MGI:5625113
  NCBI Gene: 105247052
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr5:24054452-24058037 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  401 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5625113	lncRNA gene	Chr5:24054452-24058037 (-)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  7
• Chemically induced (other)
  2
• Gene trapped
  4
• Spontaneous
  1
• Genomic Mutations
  3 involving Gm42228
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  3
• RefSeq
  1

• NCBI Gene
  105247052

Representative Sequences			Length	Strain/Species
genomic	105247052	NCBI Gene Model | MGI Sequence Detail	3586	C57BL/6J
transcript	XR_880875	RefSeq | MGI Sequence Detail	1019	C57BL/6J

References

• Summaries
  All 7

  Phenotypes 5
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17