Gm42245 Gene Detail

Summary

• Symbol
  Gm42245
• Name
  predicted gene, 42245

• Feature Type
  lncRNA gene
• IDs
  MGI:5625130
  NCBI Gene: 105247072
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr5:29886707-29904859 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  529 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5625130	lncRNA gene	Chr5:29886707-29904859 (-)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  7 phenotype references
  

• All Mutations and Alleles
  5
• Chemically induced (other)
  2
• Gene trapped
  2
• Spontaneous
  1
• Genomic Mutations
  3 involving Gm42245
• Find Mice (IMSR)
  0 strains or lines available

Expression

• cDNA Data
  1

Sequences &
Gene Models

• All Sequences
  5
• RefSeq
  2

• NCBI Gene
  105247072

Representative Sequences			Length	Strain/Species
genomic	105247072	NCBI Gene Model | MGI Sequence Detail	18153	C57BL/6J
transcript	AK029039	GenBank | ENA | DDBJ | MGI Sequence Detail	3454	C57BL/6J

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 10

  Phenotypes 7
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
• Latest
  J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9