Sult1c2-ps1 Pseudogene Detail

Summary

• Symbol
  Sult1c2-ps1
• Name
  sulfotransferase family, cytosolic, 1C, member 2, pseudogene 1
• Synonyms
  Gm43862

• Feature Type
  pseudogene
• IDs
  MGI:5645886
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr17:54182018-54182578 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, Syntenic

Strain
Comparison

• SNPs within 2kb
  169 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5645886	pseudogene	Chr17:54182018-54182578 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0040202	pseudogene	Chr17:55462411-55462971 (-)
A/J	MGP_AJ_G0040188	pseudogene	Chr17:53940262-53940822 (-)
AKR/J	MGP_AKRJ_G0040119	pseudogene	Chr17:54553364-54553924 (-)
BALB/cJ	MGP_BALBcJ_G0040180	pseudogene	Chr17:53787563-53788123 (-)
C3H/HeJ	MGP_C3HHeJ_G0039825	pseudogene	Chr17:55244327-55244887 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0040775	pseudogene	Chr17:57625367-57625927 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0038912	pseudogene	Chr17:55600832-55601380 (-)
CBA/J	MGP_CBAJ_G0039793	pseudogene	Chr17:59755245-59755805 (-)
DBA/2J	MGP_DBA2J_G0039989	pseudogene	Chr17:52674678-52675238 (-)
FVB/NJ	MGP_FVBNJ_G0039948	pseudogene	Chr17:52308328-52308888 (-)
LP/J	MGP_LPJ_G0040030	pseudogene	Chr17:56138597-56139157 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0039940	pseudogene	Chr17:59179793-59180353 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0040871	pseudogene	Chr17:54902109-54902669 (-)
PWK/PhJ	MGP_PWKPhJ_G0038602	pseudogene	Chr17:52141048-52141607 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0038303	pseudogene	Chr17:51785351-51785903 (-)
WSB/EiJ	MGP_WSBEiJ_G0039134	pseudogene	Chr17:55548881-55549420 (-)

Homology

• Gene Tree
  Sult1c2-ps1
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000105732 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000105732	Ensembl Gene Model | MGI Sequence Detail	561	C57BL/6J
transcript	ENSMUST00000200231	Ensembl | MGI Sequence Detail	164	Not Applicable

Other
Accession IDs

MGI:5663999

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;