Gm42438 Gene Detail

Summary

• Symbol
  Gm42438
• Name
  predicted gene 42438

• Feature Type
  unclassified gene
• IDs
  MGI:5662575
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr5:131986431-131987404 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic

Strain
Comparison

• SNPs within 2kb
  145 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5662575	unclassified gene	Chr5:131986431-131987404 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0001794	unclassified gene	Chr5:136219645-136220618 (-)
A/J	MGP_AJ_G0001771	unclassified gene	Chr5:130440785-130441758 (-)
AKR/J	MGP_AKRJ_G0001758	unclassified gene	Chr5:134668811-134669784 (-)
BALB/cJ	MGP_BALBcJ_G0001768	unclassified gene	Chr5:131780532-131781505 (-)
C3H/HeJ	MGP_C3HHeJ_G0001746	unclassified gene	Chr5:135247162-135248135 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0001889	unclassified gene	Chr5:141379248-141380221 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0001556	unclassified gene	Chr5:124803614-124804585 (-)
CAST/EiJ	MGP_CASTEiJ_G0001716	unclassified gene	Chr5:134626780-134627746 (-)
CBA/J	MGP_CBAJ_G0001738	unclassified gene	Chr5:146944950-146945923 (-)
DBA/2J	MGP_DBA2J_G0001742	unclassified gene	Chr5:130381362-130382335 (-)
FVB/NJ	MGP_FVBNJ_G0001750	unclassified gene	Chr5:129494529-129495500 (-)
LP/J	MGP_LPJ_G0001797	unclassified gene	Chr5:136761953-136762926 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0001731	unclassified gene	Chr5:150132951-150133923 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0001878	unclassified gene	Chr5:134390619-134391590 (-)
PWK/PhJ	MGP_PWKPhJ_G0001676	unclassified gene	Chr5:129375468-129376439 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0001642	unclassified gene	Chr5:131975708-131976662 (-)
WSB/EiJ	MGP_WSBEiJ_G0001738	unclassified gene	Chr5:135105901-135106872 (-)

Homology

• Gene Tree
  Gm42438
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000106356 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000106356	Ensembl Gene Model | MGI Sequence Detail	974	C57BL/6J

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;