Gm42498 Gene Detail

Summary

• Symbol
  Gm42498
• Name
  predicted gene 42498

• Feature Type
  unclassified gene
• IDs
  MGI:5662635
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr5:128673649-128675020 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic

Strain
Comparison

• SNPs within 2kb
  126 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5662635	unclassified gene	Chr5:128673649-128675020 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0001772	unclassified gene	Chr5:132624561-132625935 (-)
A/J	MGP_AJ_G0001749	unclassified gene	Chr5:127050790-127052166 (-)
AKR/J	MGP_AKRJ_G0001736	unclassified gene	Chr5:131183236-131184607 (-)
BALB/cJ	MGP_BALBcJ_G0001746	unclassified gene	Chr5:128398380-128399756 (-)
C3H/HeJ	MGP_C3HHeJ_G0001724	unclassified gene	Chr5:131748611-131749982 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0001866	unclassified gene	Chr5:137700968-137702339 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0001535	unclassified gene	Chr5:121475406-121476770 (-)
CAST/EiJ	MGP_CASTEiJ_G0001695	unclassified gene	Chr5:130995848-130997227 (-)
CBA/J	MGP_CBAJ_G0001716	unclassified gene	Chr5:143081798-143083169 (-)
DBA/2J	MGP_DBA2J_G0001720	unclassified gene	Chr5:127041821-127043192 (-)
FVB/NJ	MGP_FVBNJ_G0001728	unclassified gene	Chr5:126092279-126093650 (-)
LP/J	MGP_LPJ_G0001775	unclassified gene	Chr5:133137861-133139234 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0001709	unclassified gene	Chr5:146478955-146480326 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0001856	unclassified gene	Chr5:130840522-130841895 (-)
PWK/PhJ	MGP_PWKPhJ_G0001654	unclassified gene	Chr5:125930416-125931789 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0001620	unclassified gene	Chr5:128412557-128413925 (-)
WSB/EiJ	MGP_WSBEiJ_G0001716	unclassified gene	Chr5:131503703-131505073 (-)

Homology

• Gene Tree
  Gm42498
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000105059 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000105059	Ensembl Gene Model | MGI Sequence Detail	1372	C57BL/6J

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;