Gm42510 Gene Detail

Summary

• Symbol
  Gm42510
• Name
  predicted gene 42510

• Feature Type
  unclassified gene
• IDs
  MGI:5662647
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr3:123479364-123481621 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic

Strain
Comparison

• SNPs within 2kb
  160 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5662647	unclassified gene	Chr3:123479364-123481621 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0001257	unclassified gene	Chr3:126006762-126009584 (-)
A/J	MGP_AJ_G0001239	unclassified gene	Chr3:121776132-121780156 (-)
AKR/J	MGP_AKRJ_G0001224	unclassified gene	Chr3:124896799-124899052 (-)
BALB/cJ	MGP_BALBcJ_G0001233	unclassified gene	Chr3:121585108-121587770 (-)
C3H/HeJ	MGP_C3HHeJ_G0001211	unclassified gene	Chr3:125278365-125281400 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0001348	unclassified gene	Chr3:130572246-130576091 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0001053	unclassified gene	Chr3:117192843-117195095 (-)
CAST/EiJ	MGP_CASTEiJ_G0001193	unclassified gene	Chr3:124711082-124714426 (-)
CBA/J	MGP_CBAJ_G0001202	unclassified gene	Chr3:134961523-134963814 (-)
DBA/2J	MGP_DBA2J_G0001206	unclassified gene	Chr3:120914038-120916773 (-)
FVB/NJ	MGP_FVBNJ_G0001217	unclassified gene	Chr3:118537527-118539795 (-)
LP/J	MGP_LPJ_G0001264	unclassified gene	Chr3:127546883-127549180 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0001203	unclassified gene	Chr3:142540432-142543475 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0001339	unclassified gene	Chr3:124461894-124465661 (-)
PWK/PhJ	MGP_PWKPhJ_G0001149	unclassified gene	Chr3:120655849-120658368 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0001126	unclassified gene	Chr3:122564593-122566842 (-)
WSB/EiJ	MGP_WSBEiJ_G0001210	unclassified gene	Chr3:125213478-125216637 (-)

Homology

• Gene Tree
  Gm42510
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000104860 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000104860	Ensembl Gene Model | MGI Sequence Detail	2258	C57BL/6J

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;

TSS for Gm42510:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr35505	Chr3:123482334-123482335 (-)	-714 bp