Gm42527 Gene Detail

Summary

• Symbol
  Gm42527
• Name
  predicted gene 42527

• Feature Type
  unclassified gene
• IDs
  MGI:5662664
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr9:111240502-111241981 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, Syntenic

Strain
Comparison

• SNPs within 2kb
  225 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5662664	unclassified gene	Chr9:111240502-111241981 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0002402	unclassified gene	Chr9:113648298-113649793 (+)
A/J	MGP_AJ_G0002381	unclassified gene	Chr9:109486417-109487896 (+)
AKR/J	MGP_AKRJ_G0002365	unclassified gene	Chr9:112218195-112219674 (+)
BALB/cJ	MGP_BALBcJ_G0002376	unclassified gene	Chr9:109236612-109238091 (+)
C3H/HeJ	MGP_C3HHeJ_G0002353	unclassified gene	Chr9:112721192-112722671 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0002502	unclassified gene	Chr9:116757793-116759272 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002100	unclassified gene	Chr9:106688645-106690110 (+)
CAST/EiJ	MGP_CASTEiJ_G0002314	unclassified gene	Chr9:112535358-112536855 (+)
CBA/J	MGP_CBAJ_G0002346	unclassified gene	Chr9:121074244-121075739 (+)
DBA/2J	MGP_DBA2J_G0002350	unclassified gene	Chr9:108934066-108935545 (+)
FVB/NJ	MGP_FVBNJ_G0002358	unclassified gene	Chr9:107774217-107775696 (+)
LP/J	MGP_LPJ_G0002403	unclassified gene	Chr9:113922044-113923539 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0002333	unclassified gene	Chr9:122373366-122374845 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0002490	unclassified gene	Chr9:112571445-112572928 (+)
PWK/PhJ	MGP_PWKPhJ_G0002274	unclassified gene	Chr9:109193082-109194577 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0002233	unclassified gene	Chr9:112669763-112671227 (+)
WSB/EiJ	MGP_WSBEiJ_G0002344	unclassified gene	Chr9:112427398-112428881 (+)

Homology

• Gene Tree
  Gm42527
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000105592 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000105592	Ensembl Gene Model | MGI Sequence Detail	1480	C57BL/6J

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;