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Gm42564 Gene Detail
Summary
  • Symbol
    Gm42564
  • Name
    predicted gene 42564
  • Feature Type
    lncRNA gene
  • IDs
    MGI:5662701
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr5:64792704-64794731 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
  • Genetic Map
    Chromosome 5, Syntenic
Strain
Comparison
more
  • SNPs within 2kb
    172 from dbSNP Build 142
  • Strain Annotations
    16
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5662701
lncRNA gene Chr5:64792704-64794731 (-)
129S1/SvImJ MGP_129S1SvImJ_G0006657
lincRNA gene Chr5:64225938-64227892 (-)
A/J MGP_AJ_G0006651
lincRNA gene Chr5:61831397-61833357 (-)
AKR/J MGP_AKRJ_G0006621
lincRNA gene Chr5:63763437-63765397 (-)
BALB/cJ MGP_BALBcJ_G0006626
lincRNA gene Chr5:62507849-62509887 (-)
C3H/HeJ MGP_C3HHeJ_G0006573
lincRNA gene Chr5:64127534-64129565 (-)
C57BL/6NJ MGP_C57BL6NJ_G0006791
lincRNA gene Chr5:66881541-66883609 (-)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0006495
lincRNA gene Chr5:63208320-63210228 (-)
CBA/J MGP_CBAJ_G0006554
lincRNA gene Chr5:69024006-69025961 (-)
DBA/2J MGP_DBA2J_G0006574
lincRNA gene Chr5:61860501-61862456 (-)
FVB/NJ MGP_FVBNJ_G0006598
lincRNA gene Chr5:61037609-61039569 (-)
LP/J MGP_LPJ_G0006658
lincRNA gene Chr5:64691405-64693394 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0006582
lincRNA gene Chr5:71933810-71935766 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0006793
lincRNA gene Chr5:63457512-63459552 (-)
PWK/PhJ MGP_PWKPhJ_G0006434
lincRNA gene Chr5:60831730-60833770 (-)
SPRET/EiJ no annotation
WSB/EiJ MGP_WSBEiJ_G0006546
lincRNA gene Chr5:63666948-63668864 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
Sequences &
Gene Models
less
  • All Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000105183 Ensembl Gene Model | MGI Sequence Detail 2028 C57BL/6J ±  kb
transcript ENSMUST00000196013 Ensembl | MGI Sequence Detail 582 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 6
    Phenotypes 4
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Funding Information
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last database update
12/10/2024
MGI 6.24
The Jackson Laboratory