Gm42589 Gene Detail

Summary

• Symbol
  Gm42589
• Name
  predicted gene 42589

• Feature Type
  unclassified gene
• IDs
  MGI:5662726
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr5:131632493-131634243 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic

Strain
Comparison

• SNPs within 2kb
  149 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5662726	unclassified gene	Chr5:131632493-131634243 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0001785	unclassified gene	Chr5:135845924-135847674 (-)
A/J	MGP_AJ_G0001762	unclassified gene	Chr5:130074327-130076077 (-)
AKR/J	MGP_AKRJ_G0001749	unclassified gene	Chr5:134302185-134303935 (-)
BALB/cJ	MGP_BALBcJ_G0001759	unclassified gene	Chr5:131423948-131425698 (-)
C3H/HeJ	MGP_C3HHeJ_G0001737	unclassified gene	Chr5:134881585-134883335 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0001880	unclassified gene	Chr5:141001347-141003097 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0001547	unclassified gene	Chr5:124442323-124444079 (-)
CAST/EiJ	MGP_CASTEiJ_G0001708	unclassified gene	Chr5:134242829-134244595 (-)
CBA/J	MGP_CBAJ_G0001729	unclassified gene	Chr5:146559991-146561741 (-)
DBA/2J	MGP_DBA2J_G0001733	unclassified gene	Chr5:130023064-130024814 (-)
FVB/NJ	MGP_FVBNJ_G0001741	unclassified gene	Chr5:129132958-129134708 (-)
LP/J	MGP_LPJ_G0001788	unclassified gene	Chr5:136370434-136372184 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0001722	unclassified gene	Chr5:149758061-149759810 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0001869	unclassified gene	Chr5:134030393-134032142 (-)
PWK/PhJ	MGP_PWKPhJ_G0001667	unclassified gene	Chr5:129014913-129016684 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0001633	unclassified gene	Chr5:131606322-131608060 (-)
WSB/EiJ	MGP_WSBEiJ_G0001729	unclassified gene	Chr5:134738139-134739888 (-)

Homology

• Gene Tree
  Gm42589
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000105470 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000105470	Ensembl Gene Model | MGI Sequence Detail	1751	C57BL/6J

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;