Gm42594 Gene Detail

Summary

• Symbol
  Gm42594
• Name
  predicted gene 42594

• Feature Type
  unclassified gene
• IDs
  MGI:5662731
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr3:20458829-20459074 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic

Strain
Comparison

• SNPs within 2kb
  132 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5662731	unclassified gene	Chr3:20458829-20459074 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0001065	unclassified gene	Chr3:17642748-17642993 (+)
A/J	MGP_AJ_G0001046	unclassified gene	Chr3:17549050-17549295 (+)
AKR/J	MGP_AKRJ_G0001031	unclassified gene	Chr3:17744893-17745138 (+)
BALB/cJ	MGP_BALBcJ_G0001038	unclassified gene	Chr3:17283823-17284068 (+)
C3H/HeJ	MGP_C3HHeJ_G0001020	unclassified gene	Chr3:17746874-17747119 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0001152	unclassified gene	Chr3:18742529-18742774 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0000875	unclassified gene	Chr3:15589551-15589796 (+)
CAST/EiJ	no annotation
CBA/J	MGP_CBAJ_G0001011	unclassified gene	Chr3:19173212-19173457 (+)
DBA/2J	MGP_DBA2J_G0001014	unclassified gene	Chr3:17148594-17148839 (+)
FVB/NJ	MGP_FVBNJ_G0001025	unclassified gene	Chr3:16799356-16799601 (+)
LP/J	MGP_LPJ_G0001073	unclassified gene	Chr3:18279920-18280165 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0001016	unclassified gene	Chr3:21239999-21240244 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0001143	unclassified gene	Chr3:17507948-17508193 (+)
PWK/PhJ	MGP_PWKPhJ_G0000962	unclassified gene	Chr3:16862724-16862969 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0000938	unclassified gene	Chr3:17294146-17294391 (-)
WSB/EiJ	MGP_WSBEiJ_G0001017	unclassified gene	Chr3:17513687-17513932 (+)

Homology

• Gene Tree
  Gm42594
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  18

• Ensembl
  ENSMUSG00000106442 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000106442	Ensembl Gene Model | MGI Sequence Detail	246	C57BL/6J

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;