Gm42598 Gene Detail

Summary

• Symbol
  Gm42598
• Name
  predicted gene 42598

• Feature Type
  unclassified gene
• IDs
  MGI:5662735
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr5:7283401-7285837 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic

Strain
Comparison

• SNPs within 2kb
  229 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5662735	unclassified gene	Chr5:7283401-7285837 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0001378	unclassified gene	Chr5:4200141-4203424 (-)
A/J	MGP_AJ_G0001359	unclassified gene	Chr5:4045365-4051332 (-)
AKR/J	MGP_AKRJ_G0001344	unclassified gene	Chr5:4151938-4154362 (-)
BALB/cJ	MGP_BALBcJ_G0001354	unclassified gene	Chr5:4249146-4252262 (-)
C3H/HeJ	MGP_C3HHeJ_G0001331	unclassified gene	Chr5:4333636-4336030 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0001470	unclassified gene	Chr5:4635132-4637556 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0001312	unclassified gene	Chr5:4247225-4249535 (-)
CBA/J	MGP_CBAJ_G0001323	unclassified gene	Chr5:4757766-4761769 (-)
DBA/2J	MGP_DBA2J_G0001329	unclassified gene	Chr5:4187609-4190057 (-)
FVB/NJ	MGP_FVBNJ_G0001338	unclassified gene	Chr5:3987461-3990113 (-)
LP/J	MGP_LPJ_G0001384	unclassified gene	Chr5:4306259-4310405 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0001324	unclassified gene	Chr5:4687087-4689495 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0001460	unclassified gene	Chr5:4172385-4176154 (-)
PWK/PhJ	MGP_PWKPhJ_G0001266	unclassified gene	Chr5:4037373-4039907 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0001240	unclassified gene	Chr5:4420696-4423792 (-)
WSB/EiJ	MGP_WSBEiJ_G0001327	unclassified gene	Chr5:4214379-4216747 (-)

Homology

• Gene Tree
  Gm42598
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  18

• Ensembl
  ENSMUSG00000105711 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000105711	Ensembl Gene Model | MGI Sequence Detail	2437	C57BL/6J

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;