Gm42611 Gene Detail

Summary

• Symbol
  Gm42611
• Name
  predicted gene 42611

• Feature Type
  unclassified gene
• IDs
  MGI:5662748
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr3:157685885-157689291 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic

Strain
Comparison

• SNPs within 2kb
  106 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5662748	unclassified gene	Chr3:157685885-157689291 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0001340	unclassified gene	Chr3:162140270-162143629 (+)
A/J	MGP_AJ_G0001321	unclassified gene	Chr3:156228430-156231895 (+)
AKR/J	MGP_AKRJ_G0001308	unclassified gene	Chr3:160377192-160380491 (+)
BALB/cJ	MGP_BALBcJ_G0001316	unclassified gene	Chr3:156042981-156046388 (+)
C3H/HeJ	MGP_C3HHeJ_G0001294	unclassified gene	Chr3:160777325-160781266 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0001434	unclassified gene	Chr3:167455185-167459006 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0001133	unclassified gene	Chr3:150839673-150843418 (+)
CAST/EiJ	MGP_CASTEiJ_G0001276	unclassified gene	Chr3:160922770-160926549 (+)
CBA/J	MGP_CBAJ_G0001285	unclassified gene	Chr3:173393380-173399236 (+)
DBA/2J	MGP_DBA2J_G0001291	unclassified gene	Chr3:155275603-155278548 (+)
FVB/NJ	MGP_FVBNJ_G0001301	unclassified gene	Chr3:152626457-152629821 (+)
LP/J	MGP_LPJ_G0001346	unclassified gene	Chr3:163465664-163469013 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0001287	unclassified gene	Chr3:181980826-181985236 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0001423	unclassified gene	Chr3:160054355-160057749 (+)
PWK/PhJ	MGP_PWKPhJ_G0001231	unclassified gene	Chr3:155203212-155206682 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0001207	unclassified gene	Chr3:158263598-158266912 (+)
WSB/EiJ	MGP_WSBEiJ_G0001291	unclassified gene	Chr3:161020020-161023385 (+)

Homology

• Gene Tree
  Gm42611
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000105643 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000105643	Ensembl Gene Model | MGI Sequence Detail	3407	C57BL/6J

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;