Gm42625 Gene Detail

Summary

• Symbol
  Gm42625
• Name
  predicted gene 42625

• Feature Type
  unclassified gene
• IDs
  MGI:5662762
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr5:133472181-133473102 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic

Strain
Comparison

• SNPs within 2kb
  112 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5662762	unclassified gene	Chr5:133472181-133473102 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0001808	unclassified gene	Chr5:137765544-137766465 (+)
A/J	MGP_AJ_G0001785	unclassified gene	Chr5:131934756-131935677 (+)
AKR/J	MGP_AKRJ_G0001772	unclassified gene	Chr5:136195410-136196331 (+)
BALB/cJ	MGP_BALBcJ_G0001782	unclassified gene	Chr5:133273687-133274608 (+)
C3H/HeJ	MGP_C3HHeJ_G0001759	unclassified gene	Chr5:136729690-136730611 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0001903	unclassified gene	Chr5:142957402-142958323 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0001569	unclassified gene	Chr5:126254818-126255953 (+)
CAST/EiJ	MGP_CASTEiJ_G0001730	unclassified gene	Chr5:136183577-136184497 (+)
CBA/J	MGP_CBAJ_G0001752	unclassified gene	Chr5:148535120-148536041 (+)
DBA/2J	MGP_DBA2J_G0001756	unclassified gene	Chr5:131846490-131847411 (+)
FVB/NJ	MGP_FVBNJ_G0001764	unclassified gene	Chr5:130965451-130966372 (+)
LP/J	MGP_LPJ_G0001811	unclassified gene	Chr5:138284132-138285053 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0001745	unclassified gene	Chr5:151697359-151698280 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0001892	unclassified gene	Chr5:135925074-135925995 (+)
PWK/PhJ	MGP_PWKPhJ_G0001690	unclassified gene	Chr5:130856253-130857164 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0001656	unclassified gene	Chr5:133511295-133512216 (+)
WSB/EiJ	MGP_WSBEiJ_G0001752	unclassified gene	Chr5:136654751-136655672 (+)

Homology

• Gene Tree
  Gm42625
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000106097 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000106097	Ensembl Gene Model | MGI Sequence Detail	922	C57BL/6J

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;