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Gm42627 Pseudogene Detail
Summary
  • Symbol
    Gm42627
  • Name
    predicted gene 42627
Location &
Maps
more
  • Sequence Map
    Chr5:109051092-109051315 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, Syntenic
Strain
Comparison
more
  • SNPs within 2kb
    102 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5662764
 pseudogene Chr5:109042445-109051629 (+)
129S1/SvImJ MGP_129S1SvImJ_G0010359
 pseudogene Chr1:142902141-142902363 (-)
A/J MGP_AJ_G0010347
 pseudogene Chr1:137348952-137349174 (-)
AKR/J MGP_AKRJ_G0010318
 pseudogene Chr1:141503795-141504017 (-)
BALB/cJ MGP_BALBcJ_G0010323
 pseudogene Chr1:137699207-137699429 (-)
C3H/HeJ MGP_C3HHeJ_G0010257
 pseudogene Chr1:141582870-141583092 (-)
C57BL/6NJ MGP_C57BL6NJ_G0010598
 pseudogene Chr1:147909305-147909527 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0009281
 pseudogene Chr1:130418828-130419048 (-)
CAST/EiJ MGP_CASTEiJ_G0010076
 pseudogene Chr1:140740536-140740758 (-)
CBA/J MGP_CBAJ_G0010226
 pseudogene Chr1:153013250-153013472 (-)
DBA/2J MGP_DBA2J_G0010260
 pseudogene Chr1:136352879-136353101 (-)
FVB/NJ MGP_FVBNJ_G0010285
 pseudogene Chr1:134989680-134989902 (-)
LP/J MGP_LPJ_G0010344
 pseudogene Chr1:144006653-144006875 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0010241
 pseudogene Chr1:158675981-158676203 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0010560
 pseudogene Chr1:141280894-141281116 (-)
PWK/PhJ MGP_PWKPhJ_G0009978
 pseudogene Chr1:135434172-135434394 (-)
SPRET/EiJ MGP_SPRETEiJ_G0009790
 pseudogene Chr1:140231516-140231738 (-)
WSB/EiJ MGP_WSBEiJ_G0010146
 pseudogene Chr1:141287830-141288052 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
  • All Mutations and Alleles
    2
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Genomic Mutations
    2 involving Gm42627
  • Find Mice (IMSR)
    0 strains or lines available
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    22
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000105808 Ensembl Gene Model | MGI Sequence Detail 224 C57BL/6J ±  kb
transcript ENSMUST00000197347 Ensembl | MGI Sequence Detail 224 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 9
    Phenotypes 5
  • Earliest
    J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
  • Latest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory