Gm42632 Gene Detail

Summary

• Symbol
  Gm42632
• Name
  predicted gene 42632

• Feature Type
  lncRNA gene
• IDs
  MGI:5662769
  NCBI Gene: 118568732
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr5:67585336-67587746 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic

Strain
Comparison

• SNPs within 2kb
  143 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5662769	lncRNA gene	Chr5:67578343-67597043 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0001599	unclassified gene	Chr5:67199926-67202336 (+)
A/J	MGP_AJ_G0001580	unclassified gene	Chr5:64680869-64683279 (+)
AKR/J	MGP_AKRJ_G0001565	unclassified gene	Chr5:66756435-66758845 (+)
BALB/cJ	MGP_BALBcJ_G0001576	unclassified gene	Chr5:65363463-65365873 (+)
C3H/HeJ	MGP_C3HHeJ_G0001553	unclassified gene	Chr5:67070504-67072914 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0001694	unclassified gene	Chr5:69977491-69979901 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0001378	unclassified gene	Chr5:60730718-60733106 (+)
CAST/EiJ	MGP_CASTEiJ_G0001527	unclassified gene	Chr5:66260925-66263337 (+)
CBA/J	MGP_CBAJ_G0001544	unclassified gene	Chr5:72213161-72215571 (+)
DBA/2J	MGP_DBA2J_G0001549	unclassified gene	Chr5:64699530-64701940 (+)
FVB/NJ	MGP_FVBNJ_G0001556	unclassified gene	Chr5:63873961-63876371 (+)
LP/J	MGP_LPJ_G0001603	unclassified gene	Chr5:67696699-67699109 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0001539	unclassified gene	Chr5:75004590-75007000 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0001682	unclassified gene	Chr5:66421779-66424189 (+)
PWK/PhJ	MGP_PWKPhJ_G0001484	unclassified gene	Chr5:63735338-63737748 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0001453	unclassified gene	Chr5:65750612-65753024 (+)
WSB/EiJ	MGP_WSBEiJ_G0001544	unclassified gene	Chr5:66652348-66654758 (+)

Homology

• Gene Tree
  Gm42632
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000106832 (Evidence)
• NCBI Gene
  118568732

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000106832	Ensembl Gene Model | MGI Sequence Detail	2411	C57BL/6J
transcript	XR_004942613	RefSeq | MGI Sequence Detail	18553	C57BL/6J

References

• Summaries
  All 4
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;