Gm42645 Gene Detail

Summary

• Symbol
  Gm42645
• Name
  predicted gene 42645

• Feature Type
  unclassified gene
• IDs
  MGI:5662782
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr5:66010675-66012301 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic

Strain
Comparison

• SNPs within 2kb
  174 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5662782	unclassified gene	Chr5:66010675-66012301 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0001578	unclassified gene	Chr5:65551760-65553368 (+)
A/J	MGP_AJ_G0001559	unclassified gene	Chr5:63089249-63090798 (+)
AKR/J	MGP_AKRJ_G0001544	unclassified gene	Chr5:65113354-65114964 (+)
BALB/cJ	MGP_BALBcJ_G0001555	unclassified gene	Chr5:63782344-63783967 (+)
C3H/HeJ	MGP_C3HHeJ_G0001532	unclassified gene	Chr5:65437765-65439386 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0001673	unclassified gene	Chr5:68234029-68236413 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0001359	unclassified gene	Chr5:59153613-59155202 (+)
CAST/EiJ	MGP_CASTEiJ_G0001506	unclassified gene	Chr5:64538844-64540455 (+)
CBA/J	MGP_CBAJ_G0001523	unclassified gene	Chr5:70461234-70462841 (+)
DBA/2J	MGP_DBA2J_G0001528	unclassified gene	Chr5:63125179-63126800 (+)
FVB/NJ	MGP_FVBNJ_G0001535	unclassified gene	Chr5:62289860-62291823 (+)
LP/J	MGP_LPJ_G0001582	unclassified gene	Chr5:66036138-66037728 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0001518	unclassified gene	Chr5:73313608-73315222 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0001661	unclassified gene	Chr5:64764101-64766867 (+)
PWK/PhJ	MGP_PWKPhJ_G0001463	unclassified gene	Chr5:62100707-62102320 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0001432	unclassified gene	Chr5:64106819-64108379 (+)
WSB/EiJ	MGP_WSBEiJ_G0001523	unclassified gene	Chr5:64993032-64994644 (+)

Homology

• Gene Tree
  Gm42645
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000106713 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000106713	Ensembl Gene Model | MGI Sequence Detail	1627	C57BL/6J

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;