Gm42660 Gene Detail

Summary

• Symbol
  Gm42660
• Name
  predicted gene 42660

• Feature Type
  unclassified gene
• IDs
  MGI:5662797
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr5:21336074-21337020 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic

Strain
Comparison

• SNPs within 2kb
  130 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5662797	unclassified gene	Chr5:21336074-21337020 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0001411	unclassified gene	Chr5:18665032-18665978 (+)
A/J	MGP_AJ_G0001392	unclassified gene	Chr5:18073868-18074814 (+)
AKR/J	MGP_AKRJ_G0001378	unclassified gene	Chr5:18754540-18755486 (+)
BALB/cJ	MGP_BALBcJ_G0001388	unclassified gene	Chr5:18507086-18508032 (+)
C3H/HeJ	MGP_C3HHeJ_G0001365	unclassified gene	Chr5:18821817-18822763 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0001504	unclassified gene	Chr5:20040454-20041400 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0001201	unclassified gene	Chr5:16134089-16135011 (+)
CAST/EiJ	MGP_CASTEiJ_G0001343	unclassified gene	Chr5:18146614-18147561 (+)
CBA/J	MGP_CBAJ_G0001356	unclassified gene	Chr5:20262916-20263862 (+)
DBA/2J	MGP_DBA2J_G0001362	unclassified gene	Chr5:18354227-18355173 (+)
FVB/NJ	MGP_FVBNJ_G0001371	unclassified gene	Chr5:17763315-17764261 (+)
LP/J	MGP_LPJ_G0001417	unclassified gene	Chr5:19079628-19080574 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0001355	unclassified gene	Chr5:21577955-21578901 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0001493	unclassified gene	Chr5:18417919-18418865 (+)
PWK/PhJ	MGP_PWKPhJ_G0001298	unclassified gene	Chr5:17408075-17409021 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0001269	unclassified gene	Chr5:17778842-17779789 (+)
WSB/EiJ	MGP_WSBEiJ_G0001359	unclassified gene	Chr5:18470411-18471354 (+)

Homology

• Gene Tree
  Gm42660
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000106104 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000106104	Ensembl Gene Model | MGI Sequence Detail	947	C57BL/6J

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;