Gm42663 Pseudogene Detail

Summary

• Symbol
  Gm42663
• Name
  predicted gene 42663

• Feature Type
  pseudogene
• IDs
  MGI:5662800
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr3:129874428-129874778 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic

Strain
Comparison

• SNPs within 2kb
  147 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5662800	pseudogene	Chr3:129874428-129874778 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0012409	pseudogene	Chr3:132795183-132795533 (+)
A/J	MGP_AJ_G0012404	pseudogene	Chr3:128153323-128153673 (+)
AKR/J	MGP_AKRJ_G0012368	pseudogene	Chr3:131478012-131478362 (+)
BALB/cJ	MGP_BALBcJ_G0012387	pseudogene	Chr3:127999892-128000242 (+)
C3H/HeJ	MGP_C3HHeJ_G0012249	pseudogene	Chr3:131874471-131874821 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0012701	pseudogene	Chr3:137520421-137520771 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011065	pseudogene	Chr3:123683666-123684017 (+)
CAST/EiJ	MGP_CASTEiJ_G0012018	pseudogene	Chr3:131561993-131562343 (+)
CBA/J	MGP_CBAJ_G0012227	pseudogene	Chr3:142150583-142150933 (+)
DBA/2J	MGP_DBA2J_G0012285	pseudogene	Chr3:127348139-127348489 (+)
FVB/NJ	MGP_FVBNJ_G0012287	pseudogene	Chr3:124938985-124939335 (+)
LP/J	MGP_LPJ_G0012355	pseudogene	Chr3:134292152-134292502 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0012291	pseudogene	Chr3:150109905-150110255 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0012704	pseudogene	Chr3:131145019-131145369 (+)
PWK/PhJ	MGP_PWKPhJ_G0011857	pseudogene	Chr3:127089341-127089691 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0011675	pseudogene	Chr3:129215576-129215930 (+)
WSB/EiJ	MGP_WSBEiJ_G0012045	pseudogene	Chr3:131867593-131867943 (+)

Homology

• Gene Tree
  Gm42663
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm42663
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000106072 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000106072	Ensembl Gene Model | MGI Sequence Detail	351	C57BL/6J
transcript	ENSMUST00000199883	Ensembl | MGI Sequence Detail	351	Not Applicable

References

• Summaries
  All 6

  Diseases 1

  Phenotypes 4
• Earliest
  J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
• Latest
  J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426