Gm42791 Gene Detail

Summary

• Symbol
  Gm42791
• Name
  predicted gene 42791

• Feature Type
  protein coding gene
  BioType Conflict
  
• IDs
  MGI:5662928
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr5:148917248-148917903 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic

Strain
Comparison

• SNPs within 2kb
  139 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5662928	protein coding gene	Chr5:148917248-148917903 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0030398	protein coding gene	Chr5:154673992-154786258 (-)
A/J	MGP_AJ_G0030371	protein coding gene	Chr5:148085026-148192291 (-)
AKR/J	MGP_AKRJ_G0030298	protein coding gene	Chr5:152649545-152753290 (-)
BALB/cJ	MGP_BALBcJ_G0030380	protein coding gene	Chr5:149332833-149438632 (-)
C3H/HeJ	MGP_C3HHeJ_G0030094	protein coding gene	Chr5:153636823-153744490 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0030835	protein coding gene	Chr5:160365683-160483014 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0028048	protein coding gene	Chr5:142458198-142560191 (-)
CAST/EiJ	MGP_CASTEiJ_G0029496	protein coding gene	Chr5:153226433-153342938 (-)
CBA/J	MGP_CBAJ_G0030072	protein coding gene	Chr5:167057966-167176043 (-)
DBA/2J	MGP_DBA2J_G0030216	protein coding gene	Chr5:147748353-147849716 (-)
FVB/NJ	MGP_FVBNJ_G0030170	protein coding gene	Chr5:146988909-147088357 (-)
LP/J	MGP_LPJ_G0030303	protein coding gene	Chr5:155359518-155466937 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0030206	protein coding gene	Chr5:169242316-169353232 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0030865	protein coding gene	Chr5:152577596-152692119 (-)
PWK/PhJ	MGP_PWKPhJ_G0029210	protein coding gene	Chr5:146893295-147001486 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0029046	protein coding gene	Chr5:149876460-149984997 (-)
WSB/EiJ	MGP_WSBEiJ_G0029573	protein coding gene	Chr5:153390765-153505014 (-)

Homology

• Gene Tree
  Gm42791
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000106892 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000106892	Ensembl Gene Model | MGI Sequence Detail	656	C57BL/6J
transcript	ENSMUST00000134031	Ensembl | MGI Sequence Detail	134	Not Applicable

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;