Gm42853 Gene Detail

Summary

• Symbol
  Gm42853
• Name
  predicted gene 42853

• Feature Type
  unclassified gene
• IDs
  MGI:5662990
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr5:116594157-116595543 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic

Strain
Comparison

• SNPs within 2kb
  158 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5662990	unclassified gene	Chr5:116594157-116595543 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0001717	unclassified gene	Chr5:119461834-119463200 (-)
A/J	MGP_AJ_G0001694	unclassified gene	Chr5:114641868-114643229 (-)
AKR/J	MGP_AKRJ_G0001681	unclassified gene	Chr5:118330704-118332074 (-)
BALB/cJ	MGP_BALBcJ_G0001691	unclassified gene	Chr5:116053601-116054967 (-)
C3H/HeJ	MGP_C3HHeJ_G0001669	unclassified gene	Chr5:118847774-118849148 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0001811	unclassified gene	Chr5:124017890-124019260 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0001484	unclassified gene	Chr5:109417363-109418643 (-)
CAST/EiJ	MGP_CASTEiJ_G0001641	unclassified gene	Chr5:117827224-117828577 (-)
CBA/J	MGP_CBAJ_G0001661	unclassified gene	Chr5:128789400-128790774 (-)
DBA/2J	MGP_DBA2J_G0001665	unclassified gene	Chr5:114742399-114743769 (-)
FVB/NJ	MGP_FVBNJ_G0001673	unclassified gene	Chr5:113571223-113572629 (-)
LP/J	MGP_LPJ_G0001720	unclassified gene	Chr5:119974541-119975948 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0001654	unclassified gene	Chr5:133073161-133074527 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0001801	unclassified gene	Chr5:117836502-117837880 (-)
PWK/PhJ	MGP_PWKPhJ_G0001600	unclassified gene	Chr5:113401910-113403395 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0001566	unclassified gene	Chr5:115375444-115376801 (-)
WSB/EiJ	MGP_WSBEiJ_G0001661	unclassified gene	Chr5:118428078-118429371 (-)

Homology

• Gene Tree
  Gm42853
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000107021 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000107021	Ensembl Gene Model | MGI Sequence Detail	1387	C57BL/6J

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;